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The map label for this gene is yfeT [C]

Identifier: 153950829

GI number: 153950829

Start: 3595056

End: 3596000

Strand: Reverse

Name: yfeT [C]

Synonym: YpsIP31758_3191

Alternate gene names: 153950829

Gene position: 3596000-3595056 (Counterclockwise)

Preceding gene: 153948960

Following gene: 153950109

Centisome position: 76.13

GC content: 50.9

Gene sequence:

>945_bases
GTGAAGAATCTCTTATTATCGGTTGGTGAGAGTGTGTTATGTTCCGCAAAAATGCCTATGCTGAAACGAGAGTTTCATTA
TCGTAATGAGTTTCACTGGTTGGGGAAAGGGATGAAACAAATCGACGAACGTTTGCGGGGACATTACACACAGCTCACCC
CGCAAGAGCAGCGCGTTGCTGACTTTATTTTTGCCCATTTTGATGATCTGATCAGCTACAACAGTGCCGAACTGGCGCGA
TTGAGTGGTGTATCCAAGGCTACGGTTAGCCGTCTGTTTAAACGCCTTGGCTACGGCAGTTATCGAGAAATGCGCGAAGA
GGTGCGGGCCTTGCGCCAAAGTGGTATGCCACTAACGGATAATCGCGATGCGGTGCAGGGCAATACCTTGCTGGCCCGCC
ACTATAAACAAGAAATGGCGAACCTGGCGCATTGGGTCAATCAGTTGGATAGCCAGCAACTTACCGATGTGATCGATGCC
ATGGCACAAGCGCCGCGTATCTTGCTATTGGGGCTGCGTAACAGCTATCCGGTCGCGCTGCATTTACGCCAGCAGTTGTT
GCAGGTACGCCAGCAGGTACATGTGATCCCACAGGCAGGGCAGACATTGGCTGAGGAATTGGTGGACATTACCCCGCATG
ATCTGGTGATTGTGGTGGCATTTCGCCGTCGGCCCAAGGCGATCCGCGAAATCCTATTACACATGCAGGGTCAGGGCGTA
CCGACATTGTTGATCTGTGAGCCGCAAGCTCAGTCATTGCTGTCGCTGGCCCGTTGGCGCTTGACCACCCCACTGGACAG
TGTTTCGGCTTTTGATAGCTATTCTGCGGCGATGAGTTTAGTGAATTTACTGAGCAATGCATTACTGCATAAAATACTGG
CAGAAGGCCGCCAGCGGATACATCAAATTGCTAATTTGTATGATTCTTTGGGGGAGTTAGAATAG

Upstream 100 bases:

>100_bases
TCACCTCTGCGATCCTTTTCGCCGATTGACGGGGGACTCATTTACTGTCCGAGTGAAAGTAAGCAAGAGCTGTTCCAGAT
TGTCAGGTTTCGTGCTGAGA

Downstream 100 bases:

>100_bases
TGTGAATCAGTCGTGTGCCAGACACGCCGTTCTCTGCGGCACACGCTTTAACTCTTTATTTTTTCTTGAACTGATATCTT
CCCTTGAACTGATGTTTCCC

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; RpiR-Family Transcriptional Regulatory Protein; Sugar Isomerase; RpiR-Family Transcriptional Regulator; Transcriptional Regulator RpiR Family SIS Domain; RpiR Family Transcriptional Regulatory Protein; Transcriptional Regulator Rpir Family; HTH Transcriptional Regulator Sugar Isomerasedomain; SIS Domain-Containing Protein; SIS Domain Protein; Helix-Turn-Helix Domain RpiR Family

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKNLLLSVGESVLCSAKMPMLKREFHYRNEFHWLGKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELAR
LSGVSKATVSRLFKRLGYGSYREMREEVRALRQSGMPLTDNRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQLTDVIDA
MAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGV
PTLLICEPQAQSLLSLARWRLTTPLDSVSAFDSYSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE

Sequences:

>Translated_314_residues
MKNLLLSVGESVLCSAKMPMLKREFHYRNEFHWLGKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELAR
LSGVSKATVSRLFKRLGYGSYREMREEVRALRQSGMPLTDNRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQLTDVIDA
MAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGV
PTLLICEPQAQSLLSLARWRLTTPLDSVSAFDSYSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE
>Mature_314_residues
MKNLLLSVGESVLCSAKMPMLKREFHYRNEFHWLGKGMKQIDERLRGHYTQLTPQEQRVADFIFAHFDDLISYNSAELAR
LSGVSKATVSRLFKRLGYGSYREMREEVRALRQSGMPLTDNRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQLTDVIDA
MAQAPRILLLGLRNSYPVALHLRQQLLQVRQQVHVIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGV
PTLLICEPQAQSLLSLARWRLTTPLDSVSAFDSYSAAMSLVNLLSNALLHKILAEGRQRIHQIANLYDSLGELE

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35762; Mature: 35762

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLLLSVGESVLCSAKMPMLKREFHYRNEFHWLGKGMKQIDERLRGHYTQLTPQEQRVA
CCCHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH
DFIFAHFDDLISYNSAELARLSGVSKATVSRLFKRLGYGSYREMREEVRALRQSGMPLTD
HHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
NRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQLTDVIDAMAQAPRILLLGLRNSYPVAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
HLRQQLLQVRQQVHVIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHCCCCC
PTLLICEPQAQSLLSLARWRLTTPLDSVSAFDSYSAAMSLVNLLSNALLHKILAEGRQRI
CEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQIANLYDSLGELE
HHHHHHHHHHCCCC
>Mature Secondary Structure
MKNLLLSVGESVLCSAKMPMLKREFHYRNEFHWLGKGMKQIDERLRGHYTQLTPQEQRVA
CCCHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH
DFIFAHFDDLISYNSAELARLSGVSKATVSRLFKRLGYGSYREMREEVRALRQSGMPLTD
HHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
NRDAVQGNTLLARHYKQEMANLAHWVNQLDSQQLTDVIDAMAQAPRILLLGLRNSYPVAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
HLRQQLLQVRQQVHVIPQAGQTLAEELVDITPHDLVIVVAFRRRPKAIREILLHMQGQGV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHCCCCC
PTLLICEPQAQSLLSLARWRLTTPLDSVSAFDSYSAAMSLVNLLSNALLHKILAEGRQRI
CEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQIANLYDSLGELE
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA