| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is yeeJ [C]
Identifier: 153950815
GI number: 153950815
Start: 2630391
End: 2633216
Strand: Reverse
Name: yeeJ [C]
Synonym: YpsIP31758_2329
Alternate gene names: 153950815
Gene position: 2633216-2630391 (Counterclockwise)
Preceding gene: 153950066
Following gene: 153948393
Centisome position: 55.75
GC content: 49.26
Gene sequence:
>2826_bases ATGGCTGGGGCTTCAGAAAAATATGATGCTAACGCACCGCAACAGGTCCAGCCTTATTCTGTCTCTTCATCTGCATTTGA AAATCTCCATCCTAATAATGAAATGGAGAGTTCAATCAATCCCTTTTCCGCATCGGATACAGAAAGAAATGCTGCAATAA TAGATCGCGCCAATAAGGAGCAGGAGACTGAAGCGGTGAATAAGATGATAAGCACCGGGGCCAGGTTAGCTGCATCAGGC AGGGCATCTGATGTTGCTCACTCAATGGTGGGCGATGCGGTTAATCAAGAAATCAAACAGTGGTTAAATCGATTCGGTAC GGCTCAAGTTAATCTGAATTTTGACAAAAATTTTTCGCTAAAAGAAAGCTCTCTTGATTGGCTGGCTCCTTGGTATGACT CTGCTTCATTCCTCTTTTTTAGTCAGTTAGGTATTCGCAATAAAGACAGCCGCAACACACTTAACCTTGGCGTCGGGATA CGTACATTGGAGAACGGTTGGCTGTACGGACTTAATACTTTTTATGATAATGATTTGACCGGCCACAACCACCGTATCGG TCTTGGTGCCGAGGTCTGGACCGATTATTTACAGTTGGCTGCCAATGGGTATTTTCGCCTCAATGGATGGCACTCGTCGC GTGATTTCTCCGACTATAAAGAGCGCCCAGCCACTGGGGGGGATTTGCGCGCGAATGCTTATTTACCTGCACTCCCACAA CTGGGGGGGAAGTTGATGTATGAGCAATACACCGGTGAACGTGTTGCTTTATTTGGCAAAGATAATCTGCAACGCAACCC TTATGCCGTGACTGCCGGGATCAATTACACCCCCGTGCCTCTGCTCACTGTCGGGGTAGATCAGCGTATGGGGAAAAGCA GTAAGCATGAAACACAGTGGAACCTCCAAATGAACTATCGCCTGGGCGAGAGTTTTCAGTCGCAACTTAGCCCTTCAGCG GTGGCAGGAACACGTCTACTGGCGGAGAGCCGCTATAACCTTGTCGATCGTAACAATAATATCGTGTTGGAGTATCAGAA ACAGCAGGTGGTTAAACTGACATTATCGCCAGCAACTATCTCCGGCCTGCCGGGTCAGGTTTATCAGGTGAACGCACAAG TACAAGGGGCATCTGCTGTAAGGGAAATTGTCTGGAGTGATGCCGAACTGATTGCCGCTGGCGGCACATTAACACCACTG AGTACCACACAATTCAACTTGGTTTTACCGCCTTATAAACGCACAGCACAAGTGAGTCGGGTAACGGACGACCTGACAGC CAACTTTTATTCGCTTAGTGCGCTCGCGGTTGATCACCAAGGAAACCGATCTAACTCATTCACATTGAGCGTCACCGTTC AGCAGCCTCAGTTGACATTAACGGCGGCCGTCATTGGTGATGGCGCACCGGCTAATGGGAAAACTGCAATCACCGTTGAG TTCACCGTTGCTGATTTTGAGGGGAAACCCTTAGCCGGGCAGGAGGTGGTGATAACCACCAATAATGGTGCGCTACCGAA TAAAATCACGGAAAAGACAGATGCCAACGGCGTCGCGCGCATTGCATTAACCAATACGACAGATGGCGTGACGGTAGTCA CAGCAGAAGTGGAGGGGCAACGGCAAAGTGTTGATACCCACTTTGTTAAGGGTACTATCGCGGCGGATAAATCCACTCTG GCTGCGGTACCGACATCTATCATCGCTGATGGTCTAATGGCTTCAACCATCACGTTGGAGTTGAAGGATACCTATGGGGA CCCGCAGGCTGGCGCGAATGTGGCTTTTGACACAACCTTAGGCAATATGGGCGTTATCACGGATCACAATGACGGCACTT ATAGCGCACCATTGACCAGTACCACGTTGGGGGTAGCAACAGTAACGGTGAAAGTGGATGGGGCTGCGTTCAGTGTGCCG AGTGTGACGGTTAATTTCACGGCAGATCCTATTCCAGATGCTGGCCGCTCCAGTTTCACCGTCTCCACACCGGATATCTT GGCTGATGGCACGATGAGTTCCACATTATCCTTTGTCCCTGTCGATAAGAATGGCCATTTTATCAGTGGGATGCAGGGCT TGAGTTTTACTCAAAACGGTGTGCCGGTGAGTATTAGCCCCATTACCGAGCAGCCAGATAGCTATACCGCGACGGTGGTT GGGAATAGTGTCGGTGATGTCACAATCACGCCGCAGGTTGATACCCTGATACTGAGTACATTGCAGAAAAAAATATCCCT ATTCCCGGTACCTACGCTGACCGGTATTCTGGTTAACGGGCAAAATTTCGCTACGGATAAAGGGTTCCCGAAAACGATCT TTAAAAACGCCACATTCCAGTTACAGATGGATAACGATGTTGCTAATAATACTCAGTATGAGTGGTCGTCGTCATTCACA CCCAATGTATCGGTTAACGATCAGGGTCAGGTGACGATTACCTACCAAACCTATAGCGAAGTGGCTGTGACGGCGAAAAG TAAAAAATTCCCAAGTTATTCGGTGAGTTATCGGTTCTACCCAAATCGGTGGATATACGATGGCGGCAGATCGCTGGTAT CCAGTCTCGAGGCCAGCAGACAATGCCAAGGTTCAGATATGTCTGCGGTTCTTGAATCCTCACGTGCAACCAACGGAACG CGTGCGCCTGACGGGACATTGTGGGGCGAGTGGGGGAGCTTGACCGCGTATAGTTCTGATTGGCAATCTGGTGAATATTG GGTCAAAAAGACCAGCACGGATTTTGAAACCATGAATATGGACACAGGCGCACTGCAACCAGGGCCTGCATACTTGGCGT TCCCGCTCTGTGCGCTGTCAATATAA
Upstream 100 bases:
>100_bases GATAAGGAATGCGGGAATGTCTATGTATTTTAATAAAATAATTTCATTTAATATTATTTCACGAATAGTTATTTGTATCT TTTTGATATGTGGAATGTTC
Downstream 100 bases:
>100_bases CCAGATAACAGATAGCAATAAGAACAGTTTAATGAGCTGATTATTTGGGGCGCGAATGGGAGTCCGGCAATCCTAGACTC GCCCCATAAGTAGCAAACGT
Product: invasin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 941; Mature: 940
Protein sequence:
>941_residues MAGASEKYDANAPQQVQPYSVSSSAFENLHPNNEMESSINPFSASDTERNAAIIDRANKEQETEAVNKMISTGARLAASG RASDVAHSMVGDAVNQEIKQWLNRFGTAQVNLNFDKNFSLKESSLDWLAPWYDSASFLFFSQLGIRNKDSRNTLNLGVGI RTLENGWLYGLNTFYDNDLTGHNHRIGLGAEVWTDYLQLAANGYFRLNGWHSSRDFSDYKERPATGGDLRANAYLPALPQ LGGKLMYEQYTGERVALFGKDNLQRNPYAVTAGINYTPVPLLTVGVDQRMGKSSKHETQWNLQMNYRLGESFQSQLSPSA VAGTRLLAESRYNLVDRNNNIVLEYQKQQVVKLTLSPATISGLPGQVYQVNAQVQGASAVREIVWSDAELIAAGGTLTPL STTQFNLVLPPYKRTAQVSRVTDDLTANFYSLSALAVDHQGNRSNSFTLSVTVQQPQLTLTAAVIGDGAPANGKTAITVE FTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQSVDTHFVKGTIAADKSTL AAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAAFSVP SVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVV GNSVGDVTITPQVDTLILSTLQKKISLFPVPTLTGILVNGQNFATDKGFPKTIFKNATFQLQMDNDVANNTQYEWSSSFT PNVSVNDQGQVTITYQTYSEVAVTAKSKKFPSYSVSYRFYPNRWIYDGGRSLVSSLEASRQCQGSDMSAVLESSRATNGT RAPDGTLWGEWGSLTAYSSDWQSGEYWVKKTSTDFETMNMDTGALQPGPAYLAFPLCALSI
Sequences:
>Translated_941_residues MAGASEKYDANAPQQVQPYSVSSSAFENLHPNNEMESSINPFSASDTERNAAIIDRANKEQETEAVNKMISTGARLAASG RASDVAHSMVGDAVNQEIKQWLNRFGTAQVNLNFDKNFSLKESSLDWLAPWYDSASFLFFSQLGIRNKDSRNTLNLGVGI RTLENGWLYGLNTFYDNDLTGHNHRIGLGAEVWTDYLQLAANGYFRLNGWHSSRDFSDYKERPATGGDLRANAYLPALPQ LGGKLMYEQYTGERVALFGKDNLQRNPYAVTAGINYTPVPLLTVGVDQRMGKSSKHETQWNLQMNYRLGESFQSQLSPSA VAGTRLLAESRYNLVDRNNNIVLEYQKQQVVKLTLSPATISGLPGQVYQVNAQVQGASAVREIVWSDAELIAAGGTLTPL STTQFNLVLPPYKRTAQVSRVTDDLTANFYSLSALAVDHQGNRSNSFTLSVTVQQPQLTLTAAVIGDGAPANGKTAITVE FTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQSVDTHFVKGTIAADKSTL AAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAAFSVP SVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVV GNSVGDVTITPQVDTLILSTLQKKISLFPVPTLTGILVNGQNFATDKGFPKTIFKNATFQLQMDNDVANNTQYEWSSSFT PNVSVNDQGQVTITYQTYSEVAVTAKSKKFPSYSVSYRFYPNRWIYDGGRSLVSSLEASRQCQGSDMSAVLESSRATNGT RAPDGTLWGEWGSLTAYSSDWQSGEYWVKKTSTDFETMNMDTGALQPGPAYLAFPLCALSI >Mature_940_residues AGASEKYDANAPQQVQPYSVSSSAFENLHPNNEMESSINPFSASDTERNAAIIDRANKEQETEAVNKMISTGARLAASGR ASDVAHSMVGDAVNQEIKQWLNRFGTAQVNLNFDKNFSLKESSLDWLAPWYDSASFLFFSQLGIRNKDSRNTLNLGVGIR TLENGWLYGLNTFYDNDLTGHNHRIGLGAEVWTDYLQLAANGYFRLNGWHSSRDFSDYKERPATGGDLRANAYLPALPQL GGKLMYEQYTGERVALFGKDNLQRNPYAVTAGINYTPVPLLTVGVDQRMGKSSKHETQWNLQMNYRLGESFQSQLSPSAV AGTRLLAESRYNLVDRNNNIVLEYQKQQVVKLTLSPATISGLPGQVYQVNAQVQGASAVREIVWSDAELIAAGGTLTPLS TTQFNLVLPPYKRTAQVSRVTDDLTANFYSLSALAVDHQGNRSNSFTLSVTVQQPQLTLTAAVIGDGAPANGKTAITVEF TVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQSVDTHFVKGTIAADKSTLA AVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAAFSVPS VTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVVG NSVGDVTITPQVDTLILSTLQKKISLFPVPTLTGILVNGQNFATDKGFPKTIFKNATFQLQMDNDVANNTQYEWSSSFTP NVSVNDQGQVTITYQTYSEVAVTAKSKKFPSYSVSYRFYPNRWIYDGGRSLVSSLEASRQCQGSDMSAVLESSRATNGTR APDGTLWGEWGSLTAYSSDWQSGEYWVKKTSTDFETMNMDTGALQPGPAYLAFPLCALSI
Specific function: Invasin is a protein that allows enteric bacteria to penetrate cultured mammalian cells. The entry of invasin in the cell is mediated by binding several beta-1 chain integrins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell surface [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 Big-1 (bacterial Ig-like domain 1) domains [H]
Homologues:
Organism=Escherichia coli, GI145693153, Length=444, Percent_Identity=40.3153153153153, Blast_Score=322, Evalue=1e-88, Organism=Escherichia coli, GI145693120, Length=398, Percent_Identity=32.1608040201005, Blast_Score=196, Evalue=5e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003344 - InterPro: IPR016186 - InterPro: IPR016187 - InterPro: IPR003535 - InterPro: IPR013117 - InterPro: IPR008964 - InterPro: IPR015217 [H]
Pfam domain/function: PF02369 Big_1; PF07979 Intimin_C; PF09134 Invasin_D3 [H]
EC number: NA
Molecular weight: Translated: 101539; Mature: 101408
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGASEKYDANAPQQVQPYSVSSSAFENLHPNNEMESSINPFSASDTERNAAIIDRANKE CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCH QETEAVNKMISTGARLAASGRASDVAHSMVGDAVNQEIKQWLNRFGTAQVNLNFDKNFSL HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCC KESSLDWLAPWYDSASFLFFSQLGIRNKDSRNTLNLGVGIRTLENGWLYGLNTFYDNDLT CCCCCCEEECCCCCCCEEEEHHCCCCCCCCCCEEEEEEEEEEECCCEEEEEHEEECCCCC GHNHRIGLGAEVWTDYLQLAANGYFRLNGWHSSRDFSDYKERPATGGDLRANAYLPALPQ CCCEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCEEECCCCCCCHH LGGKLMYEQYTGERVALFGKDNLQRNPYAVTAGINYTPVPLLTVGVDQRMGKSSKHETQW CCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCHHHCCCCCCCCEEE NLQMNYRLGESFQSQLSPSAVAGTRLLAESRYNLVDRNNNIVLEYQKQQVVKLTLSPATI EEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEEEEECCCEE SGLPGQVYQVNAQVQGASAVREIVWSDAELIAAGGTLTPLSTTQFNLVLPPYKRTAQVSR CCCCCCEEEEEEEECCHHHHHHHHCCCCEEEEECCEECCCCCCEEEEEECCCHHHHHHHH VTDDLTANFYSLSALAVDHQGNRSNSFTLSVTVQQPQLTLTAAVIGDGAPANGKTAITVE HHHHHHCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEE FTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCC RQSVDTHFVKGTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTL CCCCCEEEEEEEEECCCCHHHHCCHHHHHCCCEEEEEEEEEECCCCCCCCCCEEEEEECC GNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAAFSVPSVTVNFTADPIPDAGRSSFT CCEEEEEECCCCEEECCCCCCEEEEEEEEEEECCCEEECCEEEEEEECCCCCCCCCCCEE VSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVV ECCCCCEECCCHHCCEEEEEECCCCCEEECCCCCCEECCCCCEEEECCCCCCCCEEEEEE GNSVGDVTITPQVDTLILSTLQKKISLFPVPTLTGILVNGQNFATDKGFPKTIFKNATFQ CCCCCCEEECCCHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCHHHHCCCEEE LQMDNDVANNTQYEWSSSFTPNVSVNDQGQVTITYQTYSEVAVTAKSKKFPSYSVSYRFY EEECCCCCCCCCEEECCCCCCCEEECCCCCEEEEEEECCEEEEEECCCCCCCEEEEEEEC PNRWIYDGGRSLVSSLEASRQCQGSDMSAVLESSRATNGTRAPDGTLWGEWGSLTAYSSD CCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCEEEECCC WQSGEYWVKKTSTDFETMNMDTGALQPGPAYLAFPLCALSI CCCCCEEEEECCCCCEEEECCCCCCCCCCCHHEEHHHHHCC >Mature Secondary Structure AGASEKYDANAPQQVQPYSVSSSAFENLHPNNEMESSINPFSASDTERNAAIIDRANKE CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCH QETEAVNKMISTGARLAASGRASDVAHSMVGDAVNQEIKQWLNRFGTAQVNLNFDKNFSL HHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCC KESSLDWLAPWYDSASFLFFSQLGIRNKDSRNTLNLGVGIRTLENGWLYGLNTFYDNDLT CCCCCCEEECCCCCCCEEEEHHCCCCCCCCCCEEEEEEEEEEECCCEEEEEHEEECCCCC GHNHRIGLGAEVWTDYLQLAANGYFRLNGWHSSRDFSDYKERPATGGDLRANAYLPALPQ CCCEEEECCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCCCCEEECCCCCCCHH LGGKLMYEQYTGERVALFGKDNLQRNPYAVTAGINYTPVPLLTVGVDQRMGKSSKHETQW CCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEECCHHHCCCCCCCCEEE NLQMNYRLGESFQSQLSPSAVAGTRLLAESRYNLVDRNNNIVLEYQKQQVVKLTLSPATI EEEEEEEECHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCEEEEECCCEEEEEEECCCEE SGLPGQVYQVNAQVQGASAVREIVWSDAELIAAGGTLTPLSTTQFNLVLPPYKRTAQVSR CCCCCCEEEEEEEECCHHHHHHHHCCCCEEEEECCEECCCCCCEEEEEECCCHHHHHHHH VTDDLTANFYSLSALAVDHQGNRSNSFTLSVTVQQPQLTLTAAVIGDGAPANGKTAITVE HHHHHHCCEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEE FTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCC RQSVDTHFVKGTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTL CCCCCEEEEEEEEECCCCHHHHCCHHHHHCCCEEEEEEEEEECCCCCCCCCCEEEEEECC GNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAAFSVPSVTVNFTADPIPDAGRSSFT CCEEEEEECCCCEEECCCCCCEEEEEEEEEEECCCEEECCEEEEEEECCCCCCCCCCCEE VSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVV ECCCCCEECCCHHCCEEEEEECCCCCEEECCCCCCEECCCCCEEEECCCCCCCCEEEEEE GNSVGDVTITPQVDTLILSTLQKKISLFPVPTLTGILVNGQNFATDKGFPKTIFKNATFQ CCCCCCEEECCCHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCHHHHCCCEEE LQMDNDVANNTQYEWSSSFTPNVSVNDQGQVTITYQTYSEVAVTAKSKKFPSYSVSYRFY EEECCCCCCCCCEEECCCCCCCEEECCCCCEEEEEEECCEEEEEECCCCCCCEEEEEEEC PNRWIYDGGRSLVSSLEASRQCQGSDMSAVLESSRATNGTRAPDGTLWGEWGSLTAYSSD CCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCEEEECCC WQSGEYWVKKTSTDFETMNMDTGALQPGPAYLAFPLCALSI CCCCCEEEEECCCCCEEEECCCCCCCCCCCHHEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3304658; 1693333; 10514372 [H]