| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950793
Identifier: 153950793
GI number: 153950793
Start: 2842819
End: 2844369
Strand: Reverse
Name: 153950793
Synonym: YpsIP31758_2510
Alternate gene names: NA
Gene position: 2844369-2842819 (Counterclockwise)
Preceding gene: 153950174
Following gene: 153949289
Centisome position: 60.22
GC content: 54.87
Gene sequence:
>1551_bases ATGCTGATGTCTGTACAGGAAAACCGTGCGCAGGGTACTGCGACGACCGTATTAAAGAATAGCCCTGCGGCACAAGGGGT TTACGCCGCCTTGTTTGAAAAAATCAACCTGAGCCCGGTCTCCTCACTGGCCGGTATCGAGGCGTTCCAGAACAACGATG CGCTGGCGGAAGCCACCACCGATGAGCGCGTTACCGCCGCCGTCAGTGTCTTTTTAGACCTGCTGAAGCAGTCGGCGAAG AAAGTAGAAAAACTGGATAAAACCCTGCTGGACGGCCATATTGCCGCACTGGATGACCAAATCAGCCGCCAGTTGGACGC GGTAATGCACCACCCCGATTTCCAGCGGGTGGAATCGACCTGGCGTGGTGTGAAGTCGCTGATCGATCAGACCGATTTCC GCCAGAACGTGCGCATCGAGCTGCTGGATATCAGTAAAGATCATCTGGTGCAGGATTTTGAAGATGCCCCAGAAATTTCA CAAAGCGGTTTATACGCCCAGACCTATATTCAGGAATACGACACCCCCGGCGGTGAACCGATTGCTGCGGCTATCTCCAA CTACGAGTTTGACCGTGGCCCGCAGGATATCGCCTTATTGCGCAATATCTCCAAGGTAGCCGCGGCGGCCCATATGCCGT TTATCGGCTCAGTGGGTCCGGCGTTCTTTGGTAAAGAGAACATGGAAGAGGTGGCGGCCATCAAAGATATCGGCAACTAC TTTGACCGTGCCGAATACATCAAATGGAAAGCTTTCCGCGACTCGGATGATTCCCGCTATATCGGCCTGACCATGCCGCG CGTACTGGGGCGTTTGCCTTATGGGCCAGACACCGTGCCGGTGCGCAGCTTTAACTACGTAGAGCAGGTGAAAGGGCCGG ATCATGAGCGTTATCTGTGGACCAACGCTTCGTTTGCCTTTGCTGCCAACATGGTGAAAAGCTTCATTAAAAATGGCTGG TGTGTGCAGATCCGTGGCCCGCAGGCCGGTGGTGCCGTCACCAACTTACCGATCCACCTGTACGATCTGGGTACCGGTAA TCAGGTCAAAATTCCGTCAGAAGTGATGATCCCGGAAACCCGCGAGTTCGAGTTTGCCAATCTGGGCTTTATCCCGCTGT CGTACTACAAAAACCGCGATTACTCGTGCTTCTTCTCGGCCAACTCGGCGCAGAAACCGGCGCTGTATGACACCGCGGAT GCCACGGCCAACAGCCGCATCAACGCCCGTTTGCCGTATATCTTCCTGCTGTCGCGCATTGCCCATTATCTGAAACTGAT CCAGCGCGAGAACATCGGCACCACCAAAGATCGCCGTCTGCTGGAGCTGGAGCTGAACAACTGGGTGCGCGGGCTGGTGA CGGAAATGACTGATCCGGGTGATGATTTGCAGGCGTCCCATCCCCTGCGTGATGCCAAAGTGACGGTCGAAGATATCGAA GACAACCCCGGCTTCTTCCGCGTCAAGCTGTATGCGGTACCGCATTTCCAGGTGGAAGGGATGGACGTCAATCTGTCATT GGTTTCCCAAATGCCAAAGGCTAAGGCATAA
Upstream 100 bases:
>100_bases TGCCTTGAGCGATGAACTGCGCGCTGAACTGGCGGCCCTGGCGCCAAAAGAAGGTTAATCCCGGGATTGGCTGCTGGTCA TTAGAAAGAAGAAAAGGAAC
Downstream 100 bases:
>100_bases ACGGCGACACGATGAAAATTGAACGCCCTCTGTGGGCTCGCGGGATCCTGGTGTCTCCGCAACAATTTCAACAACAGGCT TCCTGGGAGGCCTGGACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Sequences:
>Translated_516_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA >Mature_516_residues MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATTDERVTAAVSVFLDLLKQSAK KVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIS QSGLYAQTYIQEYDTPGGEPIAAAISNYEFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLWTNASFAFAANMVKSFIKNGW CVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTAD ATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57701; Mature: 57701
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATT CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCC DERVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVEST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH WRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEP HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCH IAAAISNYEFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLW HHHHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE TNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPET ECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCC REFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRI CCCCEECCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH AHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE HHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCCCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC >Mature Secondary Structure MLMSVQENRAQGTATTVLKNSPAAQGVYAALFEKINLSPVSSLAGIEAFQNNDALAEATT CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEECCC DERVTAAVSVFLDLLKQSAKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHPDFQRVEST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH WRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEISQSGLYAQTYIQEYDTPGGEP HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCCCH IAAAISNYEFDRGPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKENMEEVAAIKDIGNY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH FDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHERYLW HHHHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE TNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPET ECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCCC REFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRI CCCCEECCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH AHYLKLIQRENIGTTKDRRLLELELNNWVRGLVTEMTDPGDDLQASHPLRDAKVTVEDIE HHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC DNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCCCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA