| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950776
Identifier: 153950776
GI number: 153950776
Start: 1413200
End: 1414048
Strand: Reverse
Name: 153950776
Synonym: YpsIP31758_1202
Alternate gene names: NA
Gene position: 1414048-1413200 (Counterclockwise)
Preceding gene: 153948304
Following gene: 153949278
Centisome position: 29.94
GC content: 38.63
Gene sequence:
>849_bases ATGGCAGAAGCCACTAAGCCAGCCTTGCAGGCATTAAAATTTCCCTGCACTGTATTTAGAACCCAAAGACGTATGAATGA TTACGCTGCCGATGATATGCGGTGCGGTGATTTAAGTGAAACACAGTTAAAAACAAATTTTAAGCTAGGAGATGTATCAA CCAAGGCTAATCCGTACACTTTGACGAAAATAGCCCCATTCAATCAACGAAATGGGATGGATGAAAAAATTGAGAAGGTA ACGCGACAGGAATGTGCCAAGATCCTTTTTGAGGAATTCCGCACTCTATCCCCGTCATTCTCTCTTTACGGCCCATATAA GCACCTGATCGGAAAAATGATCAACCATATGCAGAACGGCAACGGCTCACCGTTTCGGGATATGTCTTTAGATGCAGCAT TGAAAGAGCAAATTCTGAGTGATAGCACCAAAAATAGTTCACTACAGCTTATCAAAGATACCTTGAATGAAAACATTGAC TGGAAAAATAAGTTATATCCCGTAGAAAAGGAAAACAGGCTAAAAATAGGTATATCAAGAGGGAAATTACCAAAATTCGA TAGATTGCAAGATAATTTTAATGGATTAGGTATCACGGTGCATGATACCTATGCAACGCATATCACCATAAAATCGCTAC AGATTGATAAGCAGCGTTATCGTGCTATTGTTCACTACAATATTCAGGATCACTTTGGGTTGGATGACAAAGATATTATT AAATTTCGTAATTACCGTTTTTTCCGTCTCTGGTTTGTGCTCCAACGATATAATCAGTTTGGATATAAACCCTTTATGAC TAATATGGAAGTAACCATTGAGATTGACGGTGGCCGTAATGATAATTAG
Upstream 100 bases:
>100_bases AAATGCTCATTTATAGTTATTCCCTCAGATCGGTTTAAAATAAACTCTCGGCCTGGTAAGGGGGGATTGGAAGCGGTTAA CAGCATAAAAGGAATTTATT
Downstream 100 bases:
>100_bases AAATAAAAAATTTTCATTTCTCTCGTTGCTATCATTGCTGATCATATCTTCACTGATTTATTTTTTATGGATGGAATTCA AACCGGTTAAAATCATTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAEATKPALQALKFPCTVFRTQRRMNDYAADDMRCGDLSETQLKTNFKLGDVSTKANPYTLTKIAPFNQRNGMDEKIEKV TRQECAKILFEEFRTLSPSFSLYGPYKHLIGKMINHMQNGNGSPFRDMSLDAALKEQILSDSTKNSSLQLIKDTLNENID WKNKLYPVEKENRLKIGISRGKLPKFDRLQDNFNGLGITVHDTYATHITIKSLQIDKQRYRAIVHYNIQDHFGLDDKDII KFRNYRFFRLWFVLQRYNQFGYKPFMTNMEVTIEIDGGRNDN
Sequences:
>Translated_282_residues MAEATKPALQALKFPCTVFRTQRRMNDYAADDMRCGDLSETQLKTNFKLGDVSTKANPYTLTKIAPFNQRNGMDEKIEKV TRQECAKILFEEFRTLSPSFSLYGPYKHLIGKMINHMQNGNGSPFRDMSLDAALKEQILSDSTKNSSLQLIKDTLNENID WKNKLYPVEKENRLKIGISRGKLPKFDRLQDNFNGLGITVHDTYATHITIKSLQIDKQRYRAIVHYNIQDHFGLDDKDII KFRNYRFFRLWFVLQRYNQFGYKPFMTNMEVTIEIDGGRNDN >Mature_281_residues AEATKPALQALKFPCTVFRTQRRMNDYAADDMRCGDLSETQLKTNFKLGDVSTKANPYTLTKIAPFNQRNGMDEKIEKVT RQECAKILFEEFRTLSPSFSLYGPYKHLIGKMINHMQNGNGSPFRDMSLDAALKEQILSDSTKNSSLQLIKDTLNENIDW KNKLYPVEKENRLKIGISRGKLPKFDRLQDNFNGLGITVHDTYATHITIKSLQIDKQRYRAIVHYNIQDHFGLDDKDIIK FRNYRFFRLWFVLQRYNQFGYKPFMTNMEVTIEIDGGRNDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32890; Mature: 32759
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEATKPALQALKFPCTVFRTQRRMNDYAADDMRCGDLSETQLKTNFKLGDVSTKANPYT CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEECCCCCCCCCEE LTKIAPFNQRNGMDEKIEKVTRQECAKILFEEFRTLSPSFSLYGPYKHLIGKMINHMQNG EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC NGSPFRDMSLDAALKEQILSDSTKNSSLQLIKDTLNENIDWKNKLYPVEKENRLKIGISR CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC GKLPKFDRLQDNFNGLGITVHDTYATHITIKSLQIDKQRYRAIVHYNIQDHFGLDDKDII CCCCCHHHHHCCCCCEEEEEECCEEEEEEEEEEEECHHHCEEEEEECCHHCCCCCCHHHH KFRNYRFFRLWFVLQRYNQFGYKPFMTNMEVTIEIDGGRNDN HHCCCHHHHHHHHHHHHHHCCCCCEECCEEEEEEECCCCCCC >Mature Secondary Structure AEATKPALQALKFPCTVFRTQRRMNDYAADDMRCGDLSETQLKTNFKLGDVSTKANPYT CCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEECCCCCCCCCEE LTKIAPFNQRNGMDEKIEKVTRQECAKILFEEFRTLSPSFSLYGPYKHLIGKMINHMQNG EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC NGSPFRDMSLDAALKEQILSDSTKNSSLQLIKDTLNENIDWKNKLYPVEKENRLKIGISR CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC GKLPKFDRLQDNFNGLGITVHDTYATHITIKSLQIDKQRYRAIVHYNIQDHFGLDDKDII CCCCCHHHHHCCCCCEEEEEECCEEEEEEEEEEEECHHHCEEEEEECCHHCCCCCCHHHH KFRNYRFFRLWFVLQRYNQFGYKPFMTNMEVTIEIDGGRNDN HHCCCHHHHHHHHHHHHHHCCCCCEECCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA