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The map label for this gene is rhsD [C]

Identifier: 153950752

GI number: 153950752

Start: 470313

End: 473102

Strand: Reverse

Name: rhsD [C]

Synonym: YpsIP31758_0406

Alternate gene names: 153950752

Gene position: 473102-470313 (Counterclockwise)

Preceding gene: 153949316

Following gene: 153950922

Centisome position: 10.02

GC content: 46.99

Gene sequence:

>2790_bases
ATGTCCCCAAGTTTACTAACCCAGCTTTGCACCAACACCCCCAGTATTGCCGTTCACGATAACCGGGGGTTAGCCATTCG
CACACTGGCTTATAACCGCCGCAGTCATAATGAAACCGTTGACGAACTGAGCAGCCGCAACCGCTATAACGCCTCCGGTC
AGTTAATCGCCAGCCGCGACCCGCGCCTTGAGGTGGATAATTTCCGCTATCAATACAGCCTCAGCGGTGTTCCACTGCGT
ACCGACAGCGTCGATAGCGGCAGTACGCTGCAACTGGCAGATAGTGCTGGCCGCACGGTGCTCACGCGGGATGCACACCA
CACCCGCCGCTGGGTAGAGTATGAGACCGGTGAGCACAGTTTAGATCGCCCACTAAGTTACCGCGAGCAAGCCAAAGGCG
GCCTGAAAACGGTTACCGACCGCTTTTTCTATGGCGAAAATAGCGAGCAGGATAAAAGCTGTAATCTCAATGGTCAGTGT
GTCCGCCATTACGACAGCGCCGGTTTACAGGCACTGATTAGCCAGTCAATTATTGATGTGCCGCTGCAACAGCAGCGCCG
TCTACTGACGGAGACTAAAGGCCCGGTTGACTGGTTTGGCGAGCAGGAGAACTGGGGCGCTCGCCTGAGTGAATCGCCGT
TTGTTAGCCATTGCACCACCAATGCTCTCGGCCAGTTAATCACGCAAACCGATGCCAAAGGCCATATCCAGCGCATGGCC
TATAACCGTGCCGGACAGCTTATCGGTTCGTGGTTAACGGTAAAAAATGGCATGGAGCAGCCCATTGTATACTCACTCAC
CTATTCGGCTGCTGGGCAAAAACTGCGCGAAGAGAGCGGCAACGGGGTCATTACCGAATACCGTTATGAGCCGCAAACCC
AGCGTTTAATCGGCATTAAAACCACCCGTCCGGCGAAGAAAGACCGCCCGACCCGGTTACAAGACCTGCGTTACGATTAT
GACCCGGTCGGGAATATTCTCGCCATCCATAACGACGCCGAAGCCACCCGCTTCTACCGTAATCAGAAAATCGTGCCGGA
AACCACTTACCGCTACGATGCACTGTATCAGCTTATTGAGGCCACTGGCCGTGAAGCCGATACCAACGGCATACAAAACA
GCCAGTTGCCCACGCTGGCGTCACTGAACGACAGCAACCAGTTCGTCAATTACACCCGCCACTACCACTATGACCGCGCC
GGTAACCTGCTAAAAATTCAGCACACAGGAGCCAGCCAATACAGTACCTATATCACGGTGTCCGATTCGTCCAATCATGG
CATTCAGCAACAAGATGGCATCACCGCCCATGATGTCCGCTCCCAGTTTGATGCGGCGGGTAATCAGCGACAACTGCAAC
CCGGTCAACTCCTTCACTGGAACAGCCGCAATCAGTTACAGCAAGTGGAGCCCGTGCCCCGCAACGACGGCATCAGTGAC
AGCGAAAACTATCTCTATGATGGCAGCGGTAGGCGGGTGGTCAAAATCAGTCTCCATAAAACCCATAACGCCATCCAAAC
CCGTTCAGTCATTTATTTAGCGGGACTGGAACTGCGTAGCCAATATAATGGCAATAATCTGACAGAAGATTTTCAGGTGA
TGACCGTGGGTGCCGCGGGCCGTGCTCAGGTACGGGTATTACACTGGGAGCGCGGCCAACCCGCTGATATCGTCAATGAC
CAACTGCGTTACAGTTTCGATAACCACATTGGCTCGGCATTAATCGAATTAGACAGCGACGGCGATATTATCAGCCAGGA
AGAATATTACCCATTTGGCGGCACCGCGGTGTTAGCCTCCCGTAATACCGTGGAAGCTAAATATAAAACCGTTCGTTACT
CCGGTAAAGAGCGTGACACCACCGGATTGTATTATTACGGTTACCGTTATTACCAGCCGTGGCTGGGCCGCTGGTTAAGC
GCTGACCCCGCAGGCACTATAGACGGACTGAATTTATACCGAATGGTGAGGAATAACCCAGTGGGGTTGATGGATGGGGA
TGGGTTAATGACCGATGAACAATTAAAGGAAAATATAAATATGCTAAAAAAAATAGGGTTATCAACAATAGAAGATTTAA
AGCAAACACTCTCAATGTTTAATTACAGCAAGGAAGATAATGAGAAGCTATTTTATTTGATGCAAGAGCAAATATTGAAT
CAAAGCGTTTCAATTTCAGATGATGAGATTATATTTACAGAAGAAAATAGAATGTCTGATTCTGAATATTCTGATGATGA
TGATGATGATGACACGTTAGAAAATGAAGTGGAAATAAGTATGGAAAATTATCGAAAAGTGAGTCATAAACTGGCACTAA
GTACGACAGGAATGGGGGACTGCACATCGATTGCAATATTTTCTTCAACTGAAAAAAGCCTAATGCATATCAGTGGATCA
AATTTGGAAACACCAATGAAAATATATAAGGAACGTGAAAAACTTGCTTATTCACACTCGACTGCCGGATCCGTTGTTGT
TGATTTAACCGAAAAAATTGAAAATTACAACAATAAGAAAATAGCAATTATATTTGGAATTAACAATGGTTCCATGGGCT
TCGAGATTTTTTTAGACCAATATTACAAAGGAAGTAAACCACTACTTGACCTGCTCTATAATTTTAAAAAAGAAAACATT
AGTTTTTATAAAAATATAAAGGTTGGAATAAGTCAAGAGGGAGAAATATTTAGTGATTTAAATACAAGAACGCGACTTAA
ATCCATTTCTATTAACGATAGAGAAGAGCTACTTTCAATGATATTTAATCGAGAGTATAGCGATTGTTAA

Upstream 100 bases:

>100_bases
GGGGATAAAAGAGGGCAGCTAATACCCCTGTATTTTGAAGGACGATGGGTATACATAATCTATTTAAACAGTAATGATTC
ATATATTAAGGAGCCATTTT

Downstream 100 bases:

>100_bases
TACAATGATGTGCTCCCCCCCAAAAACATATATTCACAACTTGACTTCGTTTTGTCATCGACAAAATGACTTCATAGAAT
CACCTAATGGATGTGCAAAT

Product: insecticidal toxin complex protein

Products: NA

Alternate protein names: Insecticidal xin Complex; Insecticidal xin Protein; Insecticidal xin Complex Protein; C Component Of Insecticidal xin Complex; Rhs Family Protein-Like Protein; YD Repeat Protein; Insecticidal xin; Zinc Finger C2H2-Type Domain-Containing Protein; FG-GAP Repeat Protein; Insecticidal xin SepC/Tcc Class; Insecticial xin; Integrins Alpha Chain; Insecticidal xin Complex-Like Protein; Insecticial xin Complex; Cytoplasmic Membrane Protein; Insecticidal xin SepC/TccC; Rhs Family Protein; Insecticidal xin Complex Protein TcaC; Insecticidal xin Complex TccC; Insecticidal xin Complex Protein Tccc

Number of amino acids: Translated: 929; Mature: 928

Protein sequence:

>929_residues
MSPSLLTQLCTNTPSIAVHDNRGLAIRTLAYNRRSHNETVDELSSRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLR
TDSVDSGSTLQLADSAGRTVLTRDAHHTRRWVEYETGEHSLDRPLSYREQAKGGLKTVTDRFFYGENSEQDKSCNLNGQC
VRHYDSAGLQALISQSIIDVPLQQQRRLLTETKGPVDWFGEQENWGARLSESPFVSHCTTNALGQLITQTDAKGHIQRMA
YNRAGQLIGSWLTVKNGMEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIGIKTTRPAKKDRPTRLQDLRYDY
DPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPTLASLNDSNQFVNYTRHYHYDRA
GNLLKIQHTGASQYSTYITVSDSSNHGIQQQDGITAHDVRSQFDAAGNQRQLQPGQLLHWNSRNQLQQVEPVPRNDGISD
SENYLYDGSGRRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAGRAQVRVLHWERGQPADIVND
QLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLASRNTVEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLS
ADPAGTIDGLNLYRMVRNNPVGLMDGDGLMTDEQLKENINMLKKIGLSTIEDLKQTLSMFNYSKEDNEKLFYLMQEQILN
QSVSISDDEIIFTEENRMSDSEYSDDDDDDDTLENEVEISMENYRKVSHKLALSTTGMGDCTSIAIFSSTEKSLMHISGS
NLETPMKIYKEREKLAYSHSTAGSVVVDLTEKIENYNNKKIAIIFGINNGSMGFEIFLDQYYKGSKPLLDLLYNFKKENI
SFYKNIKVGISQEGEIFSDLNTRTRLKSISINDREELLSMIFNREYSDC

Sequences:

>Translated_929_residues
MSPSLLTQLCTNTPSIAVHDNRGLAIRTLAYNRRSHNETVDELSSRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLR
TDSVDSGSTLQLADSAGRTVLTRDAHHTRRWVEYETGEHSLDRPLSYREQAKGGLKTVTDRFFYGENSEQDKSCNLNGQC
VRHYDSAGLQALISQSIIDVPLQQQRRLLTETKGPVDWFGEQENWGARLSESPFVSHCTTNALGQLITQTDAKGHIQRMA
YNRAGQLIGSWLTVKNGMEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIGIKTTRPAKKDRPTRLQDLRYDY
DPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPTLASLNDSNQFVNYTRHYHYDRA
GNLLKIQHTGASQYSTYITVSDSSNHGIQQQDGITAHDVRSQFDAAGNQRQLQPGQLLHWNSRNQLQQVEPVPRNDGISD
SENYLYDGSGRRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAGRAQVRVLHWERGQPADIVND
QLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLASRNTVEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLS
ADPAGTIDGLNLYRMVRNNPVGLMDGDGLMTDEQLKENINMLKKIGLSTIEDLKQTLSMFNYSKEDNEKLFYLMQEQILN
QSVSISDDEIIFTEENRMSDSEYSDDDDDDDTLENEVEISMENYRKVSHKLALSTTGMGDCTSIAIFSSTEKSLMHISGS
NLETPMKIYKEREKLAYSHSTAGSVVVDLTEKIENYNNKKIAIIFGINNGSMGFEIFLDQYYKGSKPLLDLLYNFKKENI
SFYKNIKVGISQEGEIFSDLNTRTRLKSISINDREELLSMIFNREYSDC
>Mature_928_residues
SPSLLTQLCTNTPSIAVHDNRGLAIRTLAYNRRSHNETVDELSSRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLRT
DSVDSGSTLQLADSAGRTVLTRDAHHTRRWVEYETGEHSLDRPLSYREQAKGGLKTVTDRFFYGENSEQDKSCNLNGQCV
RHYDSAGLQALISQSIIDVPLQQQRRLLTETKGPVDWFGEQENWGARLSESPFVSHCTTNALGQLITQTDAKGHIQRMAY
NRAGQLIGSWLTVKNGMEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIGIKTTRPAKKDRPTRLQDLRYDYD
PVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPTLASLNDSNQFVNYTRHYHYDRAG
NLLKIQHTGASQYSTYITVSDSSNHGIQQQDGITAHDVRSQFDAAGNQRQLQPGQLLHWNSRNQLQQVEPVPRNDGISDS
ENYLYDGSGRRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAGRAQVRVLHWERGQPADIVNDQ
LRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLASRNTVEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLSA
DPAGTIDGLNLYRMVRNNPVGLMDGDGLMTDEQLKENINMLKKIGLSTIEDLKQTLSMFNYSKEDNEKLFYLMQEQILNQ
SVSISDDEIIFTEENRMSDSEYSDDDDDDDTLENEVEISMENYRKVSHKLALSTTGMGDCTSIAIFSSTEKSLMHISGSN
LETPMKIYKEREKLAYSHSTAGSVVVDLTEKIENYNNKKIAIIFGINNGSMGFEIFLDQYYKGSKPLLDLLYNFKKENIS
FYKNIKVGISQEGEIFSDLNTRTRLKSISINDREELLSMIFNREYSDC

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 105600; Mature: 105468

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSLLTQLCTNTPSIAVHDNRGLAIRTLAYNRRSHNETVDELSSRNRYNASGQLIASRD
CCHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEECCC
PRLEVDNFRYQYSLSGVPLRTDSVDSGSTLQLADSAGRTVLTRDAHHTRRWVEYETGEHS
CCEEECCEEEEEEECCCEEECCCCCCCCEEEEECCCCCEEEECCCHHHHHHEEECCCCCC
LDRPLSYREQAKGGLKTVTDRFFYGENSEQDKSCNLNGQCVRHYDSAGLQALISQSIIDV
CCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCC
PLQQQRRLLTETKGPVDWFGEQENWGARLSESPFVSHCTTNALGQLITQTDAKGHIQRMA
CHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
YNRAGQLIGSWLTVKNGMEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIGIK
HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEE
TTRPAKKDRPTRLQDLRYDYDPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIE
CCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ATGREADTNGIQNSQLPTLASLNDSNQFVNYTRHYHYDRAGNLLKIQHTGASQYSTYITV
HCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHEEECCCCCEEEEEECCCCCEEEEEEE
SDSSNHGIQQQDGITAHDVRSQFDAAGNQRQLQPGQLLHWNSRNQLQQVEPVPRNDGISD
ECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCC
SENYLYDGSGRRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAG
CCCEEECCCCCEEEEEEEECCCCHHHHCCEEEEECHHHHHCCCCCCCCCCEEEEEECCCC
RAQVRVLHWERGQPADIVNDQLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLAS
CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCEEEEEC
RNTVEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLSADPAGTIDGLNLYRMVRNNP
CCCCEEEEEEEEECCCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHCCC
VGLMDGDGLMTDEQLKENINMLKKIGLSTIEDLKQTLSMFNYSKEDNEKLFYLMQEQILN
CEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
QSVSISDDEIIFTEENRMSDSEYSDDDDDDDTLENEVEISMENYRKVSHKLALSTTGMGD
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCC
CTSIAIFSSTEKSLMHISGSNLETPMKIYKEREKLAYSHSTAGSVVVDLTEKIENYNNKK
CEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCE
IAIIFGINNGSMGFEIFLDQYYKGSKPLLDLLYNFKKENISFYKNIKVGISQEGEIFSDL
EEEEEEECCCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHC
NTRTRLKSISINDREELLSMIFNREYSDC
CCHHEEEECCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SPSLLTQLCTNTPSIAVHDNRGLAIRTLAYNRRSHNETVDELSSRNRYNASGQLIASRD
CHHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCEEECCC
PRLEVDNFRYQYSLSGVPLRTDSVDSGSTLQLADSAGRTVLTRDAHHTRRWVEYETGEHS
CCEEECCEEEEEEECCCEEECCCCCCCCEEEEECCCCCEEEECCCHHHHHHEEECCCCCC
LDRPLSYREQAKGGLKTVTDRFFYGENSEQDKSCNLNGQCVRHYDSAGLQALISQSIIDV
CCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCC
PLQQQRRLLTETKGPVDWFGEQENWGARLSESPFVSHCTTNALGQLITQTDAKGHIQRMA
CHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
YNRAGQLIGSWLTVKNGMEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIGIK
HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEE
TTRPAKKDRPTRLQDLRYDYDPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIE
CCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ATGREADTNGIQNSQLPTLASLNDSNQFVNYTRHYHYDRAGNLLKIQHTGASQYSTYITV
HCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHEEECCCCCEEEEEECCCCCEEEEEEE
SDSSNHGIQQQDGITAHDVRSQFDAAGNQRQLQPGQLLHWNSRNQLQQVEPVPRNDGISD
ECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCC
SENYLYDGSGRRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAG
CCCEEECCCCCEEEEEEEECCCCHHHHCCEEEEECHHHHHCCCCCCCCCCEEEEEECCCC
RAQVRVLHWERGQPADIVNDQLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLAS
CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCEEEEEC
RNTVEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLSADPAGTIDGLNLYRMVRNNP
CCCCEEEEEEEEECCCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHCCC
VGLMDGDGLMTDEQLKENINMLKKIGLSTIEDLKQTLSMFNYSKEDNEKLFYLMQEQILN
CEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
QSVSISDDEIIFTEENRMSDSEYSDDDDDDDTLENEVEISMENYRKVSHKLALSTTGMGD
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCC
CTSIAIFSSTEKSLMHISGSNLETPMKIYKEREKLAYSHSTAGSVVVDLTEKIENYNNKK
CEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCCE
IAIIFGINNGSMGFEIFLDQYYKGSKPLLDLLYNFKKENISFYKNIKVGISQEGEIFSDL
EEEEEEECCCCCCCEEEEHHHCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHC
NTRTRLKSISINDREELLSMIFNREYSDC
CCHHEEEECCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA