| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153950669
Identifier: 153950669
GI number: 153950669
Start: 1320835
End: 1321854
Strand: Direct
Name: 153950669
Synonym: YpsIP31758_1119
Alternate gene names: NA
Gene position: 1320835-1321854 (Clockwise)
Preceding gene: 153947029
Following gene: 153949977
Centisome position: 27.96
GC content: 50.39
Gene sequence:
>1020_bases ATGATTTTCCAACAACAATACTTATATTGGCTGGCCGGAGTGGTGCTATTGATTGTCGCGGTGATGTCATTTCGTGATAA AGCCAATCCAAGGCGCTTAACCACCGGTTTGTTTTGGGGGTTGTATGGCTTGATTTTTCTGGTTGGCGATTGGACTTATC GGCTGGCGAATGCGCTGGCGGGCGAAGGCCCAGATGAGAAACGCGTCCTGAATATTATTGTGGGTCTGGTCGTGGTGGTC ATGGCATTGATTGCCGGGTTTGGTGGTGTAAAGCTGGGCAGTTACCACCAACGGACGCCGCAAGAGCGTGAAGTTAGCGC AAAACGTTTAGGTAATCGGCTATTTATTCCAGCATTAGCTATCCCATTGGTTACGGTTATCGGTGTGCTGTTGTTCAATA ACATACCGGCTCTGCAACAAGGGATGTTTGGTCCGGGTAACCACTCCACGCTAGTGACGCTATTTTCAATGACGGTCGGT TGTGTTCTTGGCTTGGTCCTTGCCGTGGCGATGACCCGTGAGACGGCGGCGCAACCGGTACAGGAAGCGCGCCGCTTGCT GGATTCTATCGGCTGGGCATTTATTCTACCGCAAATTCTGGCGACACTGGGGTTACTATTTACTGGCGCGGGTGTCGGGA CGGCCATTGCTCATCTTACGCAAGAATATCTGGCCGTCGACCAGCGCTTTATTGCTGTTGCGGTCTATGCTATTGGCATG GCGCTGTTAACCATGATCATGGGTAATGCGTTCGCCGCTTTCCCGATAGTGACTGCCGGTATTGGTATTCCTATTTTAGT GTTACAACACGGGGGAAACCCGGCAGTGATGGCGGCCATCGGCATGTTCTCTGGCTATTGTGGGACATTGATGACACCGA TGGCGGCCAATTATAATATTGTTCCGGCCGCATTATTGGAATTGCCGGACAAAAATGCGGTCATCAAAGCGCAAATCCCA ACCGGGGTAGCTCTGTTGATTGTTAACGTATTTTTACTGTATTTCCTGATGTTTCTCTAA
Upstream 100 bases:
>100_bases TCCTGATCCATGCCTACCGTTTACAGCGGTTAGATAAACAACTTGCTGCGGAATTAACGGCGCTGAATCAGTCTGCCCTG GCAGCTCAGGGAGAGGCTAA
Downstream 100 bases:
>100_bases GGAGAGGCGATGAGACGTGTATTAATTACCGGGTTCGAACCTTTTGGTGGGGAGCGGATCAATCCTTCCTGGGAAGTGGT CAAACAAATGAATGATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVG CVLGLVLAVAMTRETAAQPVQEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANYNIVPAALLELPDKNAVIKAQIP TGVALLIVNVFLLYFLMFL
Sequences:
>Translated_339_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVG CVLGLVLAVAMTRETAAQPVQEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANYNIVPAALLELPDKNAVIKAQIP TGVALLIVNVFLLYFLMFL >Mature_339_residues MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALAGEGPDEKRVLNIIVGLVVVV MALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALAIPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVG CVLGLVLAVAMTRETAAQPVQEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANYNIVPAALLELPDKNAVIKAQIP TGVALLIVNVFLLYFLMFL
Specific function: Unknown
COG id: COG3817
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36345; Mature: 36345
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEGPDEKRVLNIIVGLVVVVMALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH IPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVGCVLGLVLAVAMTRETAAQPV HHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANYNI HHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC VPAALLELPDKNAVIKAQIPTGVALLIVNVFLLYFLMFL HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIFQQQYLYWLAGVVLLIVAVMSFRDKANPRRLTTGLFWGLYGLIFLVGDWTYRLANALA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEGPDEKRVLNIIVGLVVVVMALIAGFGGVKLGSYHQRTPQEREVSAKRLGNRLFIPALA CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH IPLVTVIGVLLFNNIPALQQGMFGPGNHSTLVTLFSMTVGCVLGLVLAVAMTRETAAQPV HHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEARRLLDSIGWAFILPQILATLGLLFTGAGVGTAIAHLTQEYLAVDQRFIAVAVYAIGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALLTMIMGNAFAAFPIVTAGIGIPILVLQHGGNPAVMAAIGMFSGYCGTLMTPMAANYNI HHHHHHHHCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC VPAALLELPDKNAVIKAQIPTGVALLIVNVFLLYFLMFL HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA