| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153950652
Identifier: 153950652
GI number: 153950652
Start: 2069189
End: 2069647
Strand: Reverse
Name: 153950652
Synonym: YpsIP31758_1792
Alternate gene names: NA
Gene position: 2069647-2069189 (Counterclockwise)
Preceding gene: 153948909
Following gene: 153950560
Centisome position: 43.82
GC content: 49.24
Gene sequence:
>459_bases ATGACGCTATACCGCATTGTTATGCGCCGCTATCTTGCATCGGCATGGACTGGTTACGGCGCTGAAATCTATGGTGGTCG TTGGAATCATAAAGGCCATGCTGCCATCTATTTAGCCAGCAGTATTTCATTGGCTATGCTCGAAACACTGGCACATATTC AGGACAGTTCAACACTCAGCGAATTTGAATTATTCCAAATTGAAATCAGTGACAGCAGTATTATGTTGCTACAGCCGCAG GACTGGCCCACGGATTGGCGTAGCGATCCGGCACCGGTGGCAACGATGGATGTCGGCACCGAGTGGCTGGAATCAGAATC CTCGGTAGGCTTACTGGTCCCGTCCACGTTGGTGCCGTCAGAAAACAACCTACTGGTCAATCCTCATCACAAAGATTTTC CAGCGTGTTTGGCCAGCGTCAAACCGCTCTCTTTTGTCTTTGATCCACGGTTAAAATAG
Upstream 100 bases:
>100_bases GATTTGATTGGTCGTTTGGAACACGGCGTCTTTACTTAACGGCTTAAGCCGCCCGATGGAACGAAACTTATGATGCTATC CCTATGACGCTATTATCCCT
Downstream 100 bases:
>100_bases CCTTTATTATTAATGTGCTGTTTTATCTTTTTTCGGTAACGTATTTTTCAGTTGATTCATCAACTGGCGGCGGAAATCAC CCAGTTTGGGTTTATCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: RES Domain Protein
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MTLYRIVMRRYLASAWTGYGAEIYGGRWNHKGHAAIYLASSISLAMLETLAHIQDSSTLSEFELFQIEISDSSIMLLQPQ DWPTDWRSDPAPVATMDVGTEWLESESSVGLLVPSTLVPSENNLLVNPHHKDFPACLASVKPLSFVFDPRLK
Sequences:
>Translated_152_residues MTLYRIVMRRYLASAWTGYGAEIYGGRWNHKGHAAIYLASSISLAMLETLAHIQDSSTLSEFELFQIEISDSSIMLLQPQ DWPTDWRSDPAPVATMDVGTEWLESESSVGLLVPSTLVPSENNLLVNPHHKDFPACLASVKPLSFVFDPRLK >Mature_151_residues TLYRIVMRRYLASAWTGYGAEIYGGRWNHKGHAAIYLASSISLAMLETLAHIQDSSTLSEFELFQIEISDSSIMLLQPQD WPTDWRSDPAPVATMDVGTEWLESESSVGLLVPSTLVPSENNLLVNPHHKDFPACLASVKPLSFVFDPRLK
Specific function: Unknown
COG id: COG5654
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16995; Mature: 16863
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLYRIVMRRYLASAWTGYGAEIYGGRWNHKGHAAIYLASSISLAMLETLAHIQDSSTLS CHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC EFELFQIEISDSSIMLLQPQDWPTDWRSDPAPVATMDVGTEWLESESSVGLLVPSTLVPS CEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCEEEECCEECCC ENNLLVNPHHKDFPACLASVKPLSFVFDPRLK CCCEEECCCCCCHHHHHHCCCCCEEEECCCCC >Mature Secondary Structure TLYRIVMRRYLASAWTGYGAEIYGGRWNHKGHAAIYLASSISLAMLETLAHIQDSSTLS HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC EFELFQIEISDSSIMLLQPQDWPTDWRSDPAPVATMDVGTEWLESESSVGLLVPSTLVPS CEEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCEEEECCEECCC ENNLLVNPHHKDFPACLASVKPLSFVFDPRLK CCCEEECCCCCCHHHHHHCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA