| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950613
Identifier: 153950613
GI number: 153950613
Start: 331427
End: 331570
Strand: Reverse
Name: 153950613
Synonym: YpsIP31758_0293
Alternate gene names: NA
Gene position: 331570-331427 (Counterclockwise)
Preceding gene: 153950561
Following gene: 153947942
Centisome position: 7.02
GC content: 25.0
Gene sequence:
>144_bases GTGTCCCTGCCAGTAAAAAAGGCAGAATTTTATGGTTATTTTTCACCCGACAGAAATAAGAATAATCAATTAATTCATAA AATCAAAAACGATTTCCATTTTTATGGAAAATATTTTTTTAATCTTTATTTATCATATCGTTAA
Upstream 100 bases:
>100_bases GTGCCCGCTAACTGTTGTCTCATTGCTATTCCCCTTCCCAATGTTACTGCTGCCACCTCAACGCTGACCTCGCGTCACTC TTGGATTATCATCAGGTAAC
Downstream 100 bases:
>100_bases CATTTAGGAGGGATTGGCAATGATAGGAATCAGATTCCATTATTGATTTTTAATGGCTATAACTCATTGTTTAGAAAAGA GATCGGACCAGATTTAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MSLPVKKAEFYGYFSPDRNKNNQLIHKIKNDFHFYGKYFFNLYLSYR
Sequences:
>Translated_47_residues MSLPVKKAEFYGYFSPDRNKNNQLIHKIKNDFHFYGKYFFNLYLSYR >Mature_46_residues SLPVKKAEFYGYFSPDRNKNNQLIHKIKNDFHFYGKYFFNLYLSYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5844; Mature: 5713
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPVKKAEFYGYFSPDRNKNNQLIHKIKNDFHFYGKYFFNLYLSYR CCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECC >Mature Secondary Structure SLPVKKAEFYGYFSPDRNKNNQLIHKIKNDFHFYGKYFFNLYLSYR CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA