| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is fliJ2
Identifier: 153950606
GI number: 153950606
Start: 746042
End: 746479
Strand: Direct
Name: fliJ2
Synonym: YpsIP31758_0635
Alternate gene names: NA
Gene position: 746042-746479 (Clockwise)
Preceding gene: 153948482
Following gene: 153949189
Centisome position: 15.79
GC content: 50.68
Gene sequence:
>438_bases ATGAGCGATATGATCGACACACTCCAACAGCTTCAGCAATTGCGCCAGCGCTCGCTCAACCAGGTCACCAGCCAGTTAAC GCAGCAAAAACAGTTGTGTCAGCGCTATCAACGCAATATCAATGCACTAAATGCATTAACCCTCTCTGGGGAGGCATTCC CCGGTGTTTCTGCGTTACAGATGGCGAATCACGCTGACTATCAGCGCCATATCCAGCGGCTGATTGACTGGCAAAAACAG GAGCAGGCACTGGCTGATATCGAAGCTGGCAATCTACAGACACAGATGCAACAGCAGGCTCGCCGTGAAAAAATCGTGGC GGTAGTATTGGAACAACAACAAGAAGAATATCAACGTGAACAGGGGCGGTTGGCGCAAAAAAATACCGATGCTCTGGCAA CACAGTGCTGGCAACGTCAGCAGGCGGGCGATATTTAA
Upstream 100 bases:
>100_bases TCTGCGCCAGGAGGTGGGCCACCCGGCACTATTTTCTGCTAGCGTTGAACAACTGACCGGGATGTTCCCCTCCTTTGCCC CCACTGACGAGGCGTAATTC
Downstream 100 bases:
>100_bases TATCGCTCACTTCAAGCGGCCATAAAAAAAATCCGTCATAGGGAATATTCTCTATGACGGATTTTTTATTGGGTGGGAAC AATCCATAAAGTGACTACTG
Product: flagellar export protein FliJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSGEAFPGVSALQMANHADYQRHIQRLIDWQKQ EQALADIEAGNLQTQMQQQARREKIVAVVLEQQQEEYQREQGRLAQKNTDALATQCWQRQQAGDI
Sequences:
>Translated_145_residues MSDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSGEAFPGVSALQMANHADYQRHIQRLIDWQKQ EQALADIEAGNLQTQMQQQARREKIVAVVLEQQQEEYQREQGRLAQKNTDALATQCWQRQQAGDI >Mature_144_residues SDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSGEAFPGVSALQMANHADYQRHIQRLIDWQKQE QALADIEAGNLQTQMQQQARREKIVAVVLEQQQEEYQREQGRLAQKNTDALATQCWQRQQAGDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16819; Mature: 16688
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSGEAFPGVSALQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH MANHADYQRHIQRLIDWQKQEQALADIEAGNLQTQMQQQARREKIVAVVLEQQQEEYQRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGRLAQKNTDALATQCWQRQQAGDI HHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDMIDTLQQLQQLRQRSLNQVTSQLTQQKQLCQRYQRNINALNALTLSGEAFPGVSALQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH MANHADYQRHIQRLIDWQKQEQALADIEAGNLQTQMQQQARREKIVAVVLEQQQEEYQRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGRLAQKNTDALATQCWQRQQAGDI HHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA