| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950581
Identifier: 153950581
GI number: 153950581
Start: 4564549
End: 4565418
Strand: Reverse
Name: 153950581
Synonym: YpsIP31758_4054
Alternate gene names: NA
Gene position: 4565418-4564549 (Counterclockwise)
Preceding gene: 153950137
Following gene: 153948950
Centisome position: 96.66
GC content: 35.17
Gene sequence:
>870_bases ATGACGGAAACAAACATGACGGAAAAAAAGGCACCACCCAAAACGCTACCCTTACAGTTCCCATTGTGCATATTTAAAAC ACACAATCGTATGGATGATTACGGTGCTGCGGATATGAAGAACGGTGATTTGACTGAAGCCGAATTAAAGGGAAAATTTA ATCTGAGAGGGGTATCCGTTACGCTAGATCCTTACACGGGTGAAAAAACACCCACCAGTTTTGCTATGGATCATTTCAAT AAAAAACCGAAAGAAAAAGTCAATAAAGCAGAGGTCGCCAGAGTTTTATTTGATGAGTTTCGTCACTTATCCGATACGTT TTCATTTTCGGGAAAATATCAGAGTATTATGCGTAAGATGATCACGCATATGCAGATAAATAATGGTGCTCCTTTCCGTG ATTTATTACTGGATAGTGCATTAAAAGAGCAGATATTAAGTGATAAATCTAATGATAGTTCATTGCTTAAAATAAAAAAT GCTTTGATAGAAAATATTGATTGGAATAATGGTCATTATCCTATAAATAACAAAGGAATGATGACTGAAGCAATAAAAGA TACAATTTTACCTAGATTTAACCGATTAAATGATAGGATAAATGGGCTAGGTATTAGTGTTCATGCCATCCATGCAACTC ATATTACTATTAGGTCATTACAAGTCAATGGTAATGAATTTCGTGCAATTGTACACTATCGTTCACAAGATCACTTTGGC CTTGACAATACTGATATGTTGGACTCATTTTATCGCCAATTTCGTATATTCCATATTTGGTTTGTTCTCCAGCGTTGGAG AGGATTAGGCTATAAACCTTTCCTGACTAATATGGAAACCAGTATAGAAATTACAGGAAAACGAAAATAA
Upstream 100 bases:
>100_bases AGTCAGTTTCTGATAATGATTTGGGGCGGCATCTTGTTACTGGATGCCGCTTTGCGTTATGACGGATAAATTTTTTTATT AAACGGATTTAGTTAGCATT
Downstream 100 bases:
>100_bases AATGTTAAAAATAAAATACAATATCTTATTCGGGGTGATTACCATTGGAATACTTTATGCTGCCTGGGAGATTGCTAGGC CAGTAGAAATTGTTGATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTETNMTEKKAPPKTLPLQFPLCIFKTHNRMDDYGAADMKNGDLTEAELKGKFNLRGVSVTLDPYTGEKTPTSFAMDHFN KKPKEKVNKAEVARVLFDEFRHLSDTFSFSGKYQSIMRKMITHMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKN ALIENIDWNNGHYPINNKGMMTEAIKDTILPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFG LDNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMETSIEITGKRK
Sequences:
>Translated_289_residues MTETNMTEKKAPPKTLPLQFPLCIFKTHNRMDDYGAADMKNGDLTEAELKGKFNLRGVSVTLDPYTGEKTPTSFAMDHFN KKPKEKVNKAEVARVLFDEFRHLSDTFSFSGKYQSIMRKMITHMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKN ALIENIDWNNGHYPINNKGMMTEAIKDTILPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFG LDNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMETSIEITGKRK >Mature_288_residues TETNMTEKKAPPKTLPLQFPLCIFKTHNRMDDYGAADMKNGDLTEAELKGKFNLRGVSVTLDPYTGEKTPTSFAMDHFNK KPKEKVNKAEVARVLFDEFRHLSDTFSFSGKYQSIMRKMITHMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKNA LIENIDWNNGHYPINNKGMMTEAIKDTILPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFGL DNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMETSIEITGKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33418; Mature: 33287
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETNMTEKKAPPKTLPLQFPLCIFKTHNRMDDYGAADMKNGDLTEAELKGKFNLRGVSV CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEE TLDPYTGEKTPTSFAMDHFNKKPKEKVNKAEVARVLFDEFRHLSDTFSFSGKYQSIMRKM EECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ITHMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKNALIENIDWNNGHYPINNKGM HHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCC MTEAIKDTILPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFG HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCC LDNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMETSIEITGKRK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEECCCC >Mature Secondary Structure TETNMTEKKAPPKTLPLQFPLCIFKTHNRMDDYGAADMKNGDLTEAELKGKFNLRGVSV CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEE TLDPYTGEKTPTSFAMDHFNKKPKEKVNKAEVARVLFDEFRHLSDTFSFSGKYQSIMRKM EECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ITHMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKNALIENIDWNNGHYPINNKGM HHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCC MTEAIKDTILPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFG HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCC LDNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMETSIEITGKRK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA