| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is gluQ [H]
Identifier: 153950577
GI number: 153950577
Start: 3756158
End: 3757123
Strand: Direct
Name: gluQ [H]
Synonym: YpsIP31758_3339
Alternate gene names: 153950577
Gene position: 3756158-3757123 (Clockwise)
Preceding gene: 153946903
Following gene: 153948549
Centisome position: 79.52
GC content: 51.14
Gene sequence:
>966_bases GTGGTTCAACAAGCGGTCATTCAACGATCAGCTAACCAACGAGCAACGAATCAACCAACAGAATATGTTGGCCGTTTTGC ACCTTCGCCATCAGGGGATTTGCATTTTGGTTCACTGATTGCCGCACTCGGGAGTTATCTGCAAGCCCGTGCTCAAGGCG GGAAGTGGTTAGTTCGTATTGAAGATATTGATCCCCCCCGTGAAGTTCCCGGCGCGGCCTCACGTATTTTAGCGGCCTTA GAGCATTATGGTCTCCATTGGGATGGCCCGGTTATCTATCAATCACAGCGCCATGAAGCGTATCGGGCCACGCTCAACCG GCTGGAACAGCAGGGATTAAGCTATTACTGCACCTGCACCCGTAGCCGCATCCACCAGCTCGGCGGGTTCTACGACGGCT ACTGCCGTGATCGTCATTTACCCGCTAGCGGGGCGGCTATCCGTTTGCGGCAGACTCAGCCGGTTTACGCTTTTTATGAT AAATTACTCGGCGAACTGCATGCTCACCCTGCGTTGGCACAAGAAGATTTTATTATCCGTCGCCGTGACGGTCTGTTCGC TTATAATCTGGCGGTGGTGGTGGATGATGCTTTTCAGGGCGTGACCGAAATTGTACGAGGTGCTGATTTGATTGAGCCGA CGGTGCGCCAGATAGCGCTCTATCAGCAGTTGCAACACCCTGTCCCCAGCTATATACACTTGCCGTTGGCGCTGAATAAT CAGGGGAATAAGCTCTCCAAGCAGAATCATGCTCCTCCCTTGCCTAATGGCGATCCACGTCCTATTTTAATCGACGCATT AAAGTTTTTACGCCAACCGCTACCGGAATACTGGCAAGATCTTGATTTGTATTTATTATTACGTTATGCCGTTGAGCATT GGACGTTGGCGTCAATCCCACTCCAAGGGGCAATAACCCCACAGAAAACACAACGGCATTCTCAAAGTAAGCATGGTGAG CTATGA
Upstream 100 bases:
>100_bases ATTCGGTTCTCAGCCATTCGCTGCTGCTCAACTATTTTCTGCTGCTCAACCACGTGCTTCCCAATTTCCCAGCGCCCAGC TTCCCGAGACTCAACAGCCT
Downstream 100 bases:
>100_bases TTAGCCGCTGTTTTTCTGTCGTTCTGTTATTTATTAGCCACTATCGAGGTGTACCATTTTTACCCGAGTAGCCAATTTCT GCCGTAAGGTGCTGATCCGC
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MVQQAVIQRSANQRATNQPTEYVGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRIEDIDPPREVPGAASRILAAL EHYGLHWDGPVIYQSQRHEAYRATLNRLEQQGLSYYCTCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYD KLLGELHAHPALAQEDFIIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPSYIHLPLALNN QGNKLSKQNHAPPLPNGDPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLASIPLQGAITPQKTQRHSQSKHGE L
Sequences:
>Translated_321_residues MVQQAVIQRSANQRATNQPTEYVGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRIEDIDPPREVPGAASRILAAL EHYGLHWDGPVIYQSQRHEAYRATLNRLEQQGLSYYCTCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYD KLLGELHAHPALAQEDFIIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPSYIHLPLALNN QGNKLSKQNHAPPLPNGDPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLASIPLQGAITPQKTQRHSQSKHGE L >Mature_321_residues MVQQAVIQRSANQRATNQPTEYVGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRIEDIDPPREVPGAASRILAAL EHYGLHWDGPVIYQSQRHEAYRATLNRLEQQGLSYYCTCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYD KLLGELHAHPALAQEDFIIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPSYIHLPLALNN QGNKLSKQNHAPPLPNGDPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLASIPLQGAITPQKTQRHSQSKHGE L
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=249, Percent_Identity=36.9477911646586, Blast_Score=132, Evalue=3e-31, Organism=Escherichia coli, GI226510925, Length=281, Percent_Identity=70.1067615658363, Blast_Score=403, Evalue=1e-114, Organism=Escherichia coli, GI1788743, Length=239, Percent_Identity=35.5648535564854, Blast_Score=149, Evalue=3e-37, Organism=Caenorhabditis elegans, GI71993394, Length=251, Percent_Identity=31.4741035856574, Blast_Score=114, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6324540, Length=269, Percent_Identity=32.3420074349442, Blast_Score=128, Evalue=1e-30, Organism=Drosophila melanogaster, GI24665321, Length=252, Percent_Identity=35.3174603174603, Blast_Score=135, Evalue=5e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: NA
Molecular weight: Translated: 36244; Mature: 36244
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQQAVIQRSANQRATNQPTEYVGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRI CCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE EDIDPPREVPGAASRILAALEHYGLHWDGPVIYQSQRHEAYRATLNRLEQQGLSYYCTCT ECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEHH RSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYDKLLGELHAHPALAQEDFIIR HHHHHHHCCCCCCHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEE RRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPSYIHLPLALNN ECCCCEEEEHHHEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC QGNKLSKQNHAPPLPNGDPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLASIP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC LQGAITPQKTQRHSQSKHGEL CCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MVQQAVIQRSANQRATNQPTEYVGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRI CCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE EDIDPPREVPGAASRILAALEHYGLHWDGPVIYQSQRHEAYRATLNRLEQQGLSYYCTCT ECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCEEEEHH RSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYDKLLGELHAHPALAQEDFIIR HHHHHHHCCCCCCHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEE RRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPSYIHLPLALNN ECCCCEEEEHHHEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC QGNKLSKQNHAPPLPNGDPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVEHWTLASIP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC LQGAITPQKTQRHSQSKHGEL CCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA