| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950557
Identifier: 153950557
GI number: 153950557
Start: 2506842
End: 2507096
Strand: Direct
Name: 153950557
Synonym: YpsIP31758_2183
Alternate gene names: NA
Gene position: 2506842-2507096 (Clockwise)
Preceding gene: 153947223
Following gene: 153950011
Centisome position: 53.07
GC content: 52.55
Gene sequence:
>255_bases ATGAATATCCTTATTGCTGGCCTTAAACGCCTGTTGGCTAACATTATCCGTATTGGCATCGTCTCAGACGTCGATCTTGC TAACGGATTATGCCGGGTCAAAATGGGCAACCTGAAAACCGATTGGCTTAATTGGTTAACCCTGCGCGCCGGGCGGGTGC GTTTTTGGTCTGCGCCATCGCTGGGTGAGCAAGTCATGGTGATCAGTATCGGCGGCGTGCAGCGTGGTGGCGATTGGACT GAGGGGGTTAAATGA
Upstream 100 bases:
>100_bases AGAGATATTAGCATTCATACTTTATTTCATTTCCTTTGTGCCATCCCTCACACAAAACCCATCACATGCCGCGCGCGCCC GTAGGCGGCACACTGGCCGC
Downstream 100 bases:
>100_bases CCAGCGATAAATATAGCGGCATGAACCGCAACAGCGGCTTGAACATCGACGATATTGATCATATTCGCCAGTCAATCAGT GACATTCTGGCCACACCACA
Product: baseplate assembly protein V, truncation
Products: NA
Alternate protein names: Phage Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Baseplate Assembly Protein GpV; Bacteriophage Baseplate Assembly Protein V; Prophage LambdaW5 Baseplate Assembly Protein V; Baseplate Assembly Protein V Prophage; Phage-Related Baseplate Assembly Protein; Prophage Baseplate Assembly Protein; Phage-Related Baseplate Protein
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWT EGVK
Sequences:
>Translated_84_residues MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWT EGVK >Mature_84_residues MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNWLTLRAGRVRFWSAPSLGEQVMVISIGGVQRGGDWT EGVK
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9233; Mature: 9233
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNWLTLRAGRVRFWSAPS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCC LGEQVMVISIGGVQRGGDWTEGVK CCCEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNILIAGLKRLLANIIRIGIVSDVDLANGLCRVKMGNLKTDWLNWLTLRAGRVRFWSAPS CCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCC LGEQVMVISIGGVQRGGDWTEGVK CCCEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA