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The map label for this gene is nudJ [H]

Identifier: 153950458

GI number: 153950458

Start: 1872725

End: 1873171

Strand: Reverse

Name: nudJ [H]

Synonym: YpsIP31758_1613

Alternate gene names: 153950458

Gene position: 1873171-1872725 (Counterclockwise)

Preceding gene: 153947226

Following gene: 153950153

Centisome position: 39.66

GC content: 48.55

Gene sequence:

>447_bases
ATGTTTAAACCGCATGTTACTGTCGCCTGTGTCGTTCATACTCAGGGGAAATTTCTGATCGTTGAAGAAACCATCAACAA
TGAAAAACGCTGGAACCAGCCAGCCGGTCATCTGGAAGCCGATGAAACCCTCATTCAGGCAGCAGAACGCGAGTTATGGG
AAGAAACGGGGATTCGCGCGACACCACAACATTTTTTACGGATGCATCAATGGCTGGCACCGGACAATACGCCTTTTTTA
CGTTTCGCTTTTGTCATTGAATTACCCGCCCAACTGCCAACACAGCCCCATGATAGCGATATTGATCGTTGCCTGTGGCT
TAGTGCCGATGAAATATTGCAATCGACACATTTACGCTCACCGTTGGTTGCAGAGAGTATCCGTTGTTACCTGCAGCCAG
AGCGCTATTCGCTTGATCTTATAGGGACCTTTAACTGGCCGCGCTGA

Upstream 100 bases:

>100_bases
ACCGCACATGTTGGCTTCCCTACCCTGCGCCTGATTCGTTTTAGTATAGGAAATTTAAGCCTTGGCAACTTACAGCCCGG
CGAATGGAAGGAGATAACTG

Downstream 100 bases:

>100_bases
CCATCAACCAGATTTATTCAGGTAATTTAACCCGGAGAGTGAATCGGCAATGCACCGTTGCGGGCAACGTGATAAAATCC
GGCGCTTGTTTTTATAATGC

Product: NUDIX family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRATPQHFLRMHQWLAPDNTPFL
RFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRSPLVAESIRCYLQPERYSLDLIGTFNWPR

Sequences:

>Translated_148_residues
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRATPQHFLRMHQWLAPDNTPFL
RFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRSPLVAESIRCYLQPERYSLDLIGTFNWPR
>Mature_148_residues
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRATPQHFLRMHQWLAPDNTPFL
RFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRSPLVAESIRCYLQPERYSLDLIGTFNWPR

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1787379, Length=147, Percent_Identity=75.5102040816327, Blast_Score=241, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17240; Mature: 17240

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRA
CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
TPQHFLRMHQWLAPDNTPFLRFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRS
CHHHHHHHHHHCCCCCCCCEEEEEEEECHHHCCCCCCCCCCHHEEECCHHHHHHHHCCCC
PLVAESIRCYLQPERYSLDLIGTFNWPR
CHHHHHHHHEECCCCEEEEEEEECCCCC
>Mature Secondary Structure
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAERELWEETGIRA
CCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
TPQHFLRMHQWLAPDNTPFLRFAFVIELPAQLPTQPHDSDIDRCLWLSADEILQSTHLRS
CHHHHHHHHHHCCCCCCCCEEEEEEEECHHHCCCCCCCCCCHHEEECCHHHHHHHHCCCC
PLVAESIRCYLQPERYSLDLIGTFNWPR
CHHHHHHHHEECCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA