| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950452
Identifier: 153950452
GI number: 153950452
Start: 3094105
End: 3094473
Strand: Reverse
Name: 153950452
Synonym: YpsIP31758_2740
Alternate gene names: NA
Gene position: 3094473-3094105 (Counterclockwise)
Preceding gene: 153950817
Following gene: 153949094
Centisome position: 65.51
GC content: 52.57
Gene sequence:
>369_bases ATGAGCGATACTTCAAACCGCCTGGCGGGTACGGCGTATGTCACCGTGGATGGCATTACGGTCATGGTCGCGGGTAGCTT TAAATACAGCCCATCCAGAGTAAAACGTGAAACCGTCATGGGCATGGACGGGGTGCATGGCTATAAAGAAACCATCAATG CGCCTTATATTGTGTGCCAAATCCGTGACAGCGGCGGGATCTCCGTTAGTGATTTTAATGATCAGACCCATGTCAATATT GTCTGCGAACTGGCGAATGGCAAAACCATTATCGGCAGTGCGATGTGGTCGGTGAATACTCAGGAAGTGGACAGCACGGA AGGCACACTCGAGGTGCGCTGGGAAGGCGGCTCGGTGACGGAGAACTGA
Upstream 100 bases:
>100_bases GCTGTGGACCGGTGTGCTGATTAATCAATTACGTATCTTTGCTGTTCTCAATCAATTCCGCCTGCAAGCGGCCGTTTAAC CATAAAAAAGGAAATAAATT
Downstream 100 bases:
>100_bases TATGGCAGAACTGGTACGCAGTAAAACGATTTCGTTGGTTAAACCCATCGCTCACGACGCAAGCAAGACCACCTATGAGG TGGTCGAACTCAGCGAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSDTSNRLAGTAYVTVDGITVMVAGSFKYSPSRVKRETVMGMDGVHGYKETINAPYIVCQIRDSGGISVSDFNDQTHVNI VCELANGKTIIGSAMWSVNTQEVDSTEGTLEVRWEGGSVTEN
Sequences:
>Translated_122_residues MSDTSNRLAGTAYVTVDGITVMVAGSFKYSPSRVKRETVMGMDGVHGYKETINAPYIVCQIRDSGGISVSDFNDQTHVNI VCELANGKTIIGSAMWSVNTQEVDSTEGTLEVRWEGGSVTEN >Mature_121_residues SDTSNRLAGTAYVTVDGITVMVAGSFKYSPSRVKRETVMGMDGVHGYKETINAPYIVCQIRDSGGISVSDFNDQTHVNIV CELANGKTIIGSAMWSVNTQEVDSTEGTLEVRWEGGSVTEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13142; Mature: 13011
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTSNRLAGTAYVTVDGITVMVAGSFKYSPSRVKRETVMGMDGVHGYKETINAPYIVCQ CCCCCCCEEEEEEEEECCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCEEEEE IRDSGGISVSDFNDQTHVNIVCELANGKTIIGSAMWSVNTQEVDSTEGTLEVRWEGGSVT EECCCCEEEECCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCC EN CC >Mature Secondary Structure SDTSNRLAGTAYVTVDGITVMVAGSFKYSPSRVKRETVMGMDGVHGYKETINAPYIVCQ CCCCCCEEEEEEEEECCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCCEEEEE IRDSGGISVSDFNDQTHVNIVCELANGKTIIGSAMWSVNTQEVDSTEGTLEVRWEGGSVT EECCCCEEEECCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCC EN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA