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The map label for this gene is yafU [C]

Identifier: 153950441

GI number: 153950441

Start: 1411764

End: 1412645

Strand: Reverse

Name: yafU [C]

Synonym: YpsIP31758_1200

Alternate gene names: 153950441

Gene position: 1412645-1411764 (Counterclockwise)

Preceding gene: 153949278

Following gene: 153950929

Centisome position: 29.91

GC content: 41.27

Gene sequence:

>882_bases
ATGGGGGATGTTTTAAACGGTAATGTTGGCATTAACCAGCTAAAACCTCAACATGAGTATTTTGATGCTATAGGGCTAGG
AAAGGTATTAAGTGAGAATACACAATACCATGCAGTTCTCACATTAGCAGAAGCCAAAAGTATTATTGAAGATATTAACC
CTCCTCGGACACAAAGCCCAAGTAACGGAGAAGCACTGGCACGAGGATTTGAGATAGGAAATAAGGTTACTAATCCTGTG
GCGCGGGTGTTTTCCGTTACCGATCCTATTTCTGCTTATGCCGGAAATATCTACGACTCACGGGGAGTCTATGATGTTAT
CCGAGAATTTAAGCGATTCAGCATCACCGCGACAGAGTATGTGGGCGAGAATGGGCGTAAGTATATTCACATTTCTGGCT
ATGCCGGCCTTAGGCGTATTATCACTGGAACCCGTTATGGTGCCAGCCACCCACAAATGCTATCAATGGGAATCGGCCAG
CAAGGTCTCAGTTCCAATATTGTTAAAGGTCTAAAGTTCTGTATTCTCTTTTCTATTGGCTATCGAACGATTGAAGGTAT
CTTTAAAGATGAATATACCTTAGCGGAATTTATCGGCAATATAACGATGGATATGGCTAAAACAGCCATTGTCGCGGCAG
TTTCTTTTATTGTAGGTGTACTCTTCACTGCGACAGTTCTTGCAGGTGGCAGTATTATTGTCGTTGCTGGGGTAGTTTTT
GCCGTTGGCTTTGTAGCTACCGCTATCCTAGATCATTTCGATGAAAAGTATGGTATAAGTGAAAAATTAATCGCATTATT
AACCAAAGAAATGAGAAAAAAACCAAGAACACAAGAAGCAAACTTTCAGTCTATTCTTAATGGATTAGGGCGACTTAAAT
GA

Upstream 100 bases:

>100_bases
TAGCCAACGCACATACAGATTGAAGTATGACAGATATAAAACATATTAAAGAGGGATCTGAGTGACATATAAAAAGTATA
ACTCCAGTTGGGAAGGCTAC

Downstream 100 bases:

>100_bases
ATAATAGATTATTTAAAACATTAGGTGCAATCATAGTATTATTAATATTTACGCCAATGATATATTTAGTGAGCACTTAC
ATCATTTCATTAATAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALARGFEIGNKVTNPV
ARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQ
QGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKTAIVAAVSFIVGVLFTATVLAGGSIIVVAGVVF
AVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Sequences:

>Translated_293_residues
MGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALARGFEIGNKVTNPV
ARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQ
QGLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKTAIVAAVSFIVGVLFTATVLAGGSIIVVAGVVF
AVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
>Mature_292_residues
GDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSPSNGEALARGFEIGNKVTNPVA
RVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEYVGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQ
GLSSNIVKGLKFCILFSIGYRTIEGIFKDEYTLAEFIGNITMDMAKTAIVAAVSFIVGVLFTATVLAGGSIIVVAGVVFA
VGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31839; Mature: 31708

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
SNGEALARGFEIGNKVTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH
VGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIG
HCCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
YRTIEGIFKDEYTLAEFIGNITMDMAKTAIVAAVSFIVGVLFTATVLAGGSIIVVAGVVF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
GDVLNGNVGINQLKPQHEYFDAIGLGKVLSENTQYHAVLTLAEAKSIIEDINPPRTQSP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
SNGEALARGFEIGNKVTNPVARVFSVTDPISAYAGNIYDSRGVYDVIREFKRFSITATEY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHH
VGENGRKYIHISGYAGLRRIITGTRYGASHPQMLSMGIGQQGLSSNIVKGLKFCILFSIG
HCCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
YRTIEGIFKDEYTLAEFIGNITMDMAKTAIVAAVSFIVGVLFTATVLAGGSIIVVAGVVF
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AVGFVATAILDHFDEKYGISEKLIALLTKEMRKKPRTQEANFQSILNGLGRLK
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA