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The map label for this gene is yjaH [H]

Identifier: 153950342

GI number: 153950342

Start: 4332618

End: 4333319

Strand: Reverse

Name: yjaH [H]

Synonym: YpsIP31758_3845

Alternate gene names: 153950342

Gene position: 4333319-4332618 (Counterclockwise)

Preceding gene: 153947801

Following gene: 153949092

Centisome position: 91.74

GC content: 52.42

Gene sequence:

>702_bases
GTGTCAGTAAAAATAATAAGCAGGGGGGGGATAAAACCCCTTTTGTTTATGCGGCGGGTGCTGATAACCTTCGGATTAAC
CTTGGGTCTCAGCGCCTGTAGCAGCCTGTCAGATCCCCCTCAATTCAGTGCCAGCGGGTATATCGCCGATAGCGGTGTTG
TTCGTTTATGGCGTCAGGATAATGCGCAGCAGCAACCCCAGGTGTTGATGAGCGTTTACAGTCCCTACTTCGGGGGCAAT
ACCCGAGTGACCTTCTACGAGTACCAGAATGGCATTTTACGGGAAATCCGTCGCAATGATTTAGGCGCTACCCCACAGAG
TGTCCAGTTGCGTTTCGATGAGCAAGGGCAGGTTAGCTTTATGCAACGCCAGCTCGCATCGCGTCGTGAGTCGCTCTCTG
CTGATGATATAGCGGTTTATCAGTTGGAAGCTAAACGCATTTTGGAACTCAGTCGTGTGCTACGTGCGGGTGACGTAAGG
TTAATTCAGGGGCGTTGGCAGGATGGCATGCTTACTACCTGTGCAGGTAAAACGTTGCGTCTGAATCTGGATGATAATTC
GCAGGCATGGCTGACAACGCGGGGTGAGAAGAACACGCAGCCTCTTGGTGTCGCATGGCTGGATTCATCTGAAGGGCAAC
AACTTCTGCTGGTCGCGAATCAGGACTTCTGCCGTTGGGAACCTCAGGCAGGCAGCCTGTAA

Upstream 100 bases:

>100_bases
GGCCGCAACCCACAAACGGGTAAAGAAATCAAAATTGCTGCCGCTAATGTACCCGCGTTTGTTTCTGGTAAGGCACTGAA
AGACGCTGTTAAGTCATAGT

Downstream 100 bases:

>100_bases
GTTACCGATGAGCTATAAGTTAACCAATGACCTATAAGCTGCTGGTTATCAGCGGTGCAGCGTCATAAGATAGCCAGTAA
TCGATTATGATCCGCAATAA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSVKIISRGGIKPLLFMRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGN
TRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVR
LIQGRWQDGMLTTCAGKTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL

Sequences:

>Translated_233_residues
MSVKIISRGGIKPLLFMRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGN
TRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVR
LIQGRWQDGMLTTCAGKTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
>Mature_232_residues
SVKIISRGGIKPLLFMRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQDNAQQQPQVLMSVYSPYFGGNT
RVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSFMQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRL
IQGRWQDGMLTTCAGKTLRLNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790434, Length=231, Percent_Identity=40.2597402597403, Blast_Score=167, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010858
- InterPro:   IPR012640
- InterPro:   IPR016500 [H]

Pfam domain/function: PF07356 DUF1481; PF08139 VirB [H]

EC number: NA

Molecular weight: Translated: 26164; Mature: 26033

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKIISRGGIKPLLFMRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQD
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECC
NAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSF
CCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
MQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAGKTLR
HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEE
LNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
EEECCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCCC
>Mature Secondary Structure 
SVKIISRGGIKPLLFMRRVLITFGLTLGLSACSSLSDPPQFSASGYIADSGVVRLWRQD
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEEECC
NAQQQPQVLMSVYSPYFGGNTRVTFYEYQNGILREIRRNDLGATPQSVQLRFDEQGQVSF
CCCCHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHH
MQRQLASRRESLSADDIAVYQLEAKRILELSRVLRAGDVRLIQGRWQDGMLTTCAGKTLR
HHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCEEE
LNLDDNSQAWLTTRGEKNTQPLGVAWLDSSEGQQLLLVANQDFCRWEPQAGSL
EEECCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]