| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950316
Identifier: 153950316
GI number: 153950316
Start: 2530850
End: 2531173
Strand: Direct
Name: 153950316
Synonym: YpsIP31758_2213
Alternate gene names: NA
Gene position: 2530850-2531173 (Clockwise)
Preceding gene: 153947894
Following gene: 153950196
Centisome position: 53.58
GC content: 36.42
Gene sequence:
>324_bases ATGTCAGATAAACCAGTTTCAGCCCAAGATAAGTTTATGTTGCGCCTACCTGATGGTATGAGGGAAGCGATAGGAGAACG TGCCAAGCAAAATGGCCGTTCAATGAATTCTGAGATAGTACAAATCCTTCAAGACGCTATAGATGGGGAGAAAAATTTAA CTGACCTCTCGTTACTTATTGAAAAAATACCTTCAAATGCAAATAGCGATGAAATAACTGAAGTTTTCAGGAAGCTGGTT GATCAACAAAATGAACTTCTCAAAAAATTTCTTGAACAAAACAATGTAATGAGAGTAATGCTTAAAGAAGCAAACAAAAG CTGA
Upstream 100 bases:
>100_bases TGAGACCATAACGAAATAATGTCATTATGACATCAGTTGATATAGTGTCAATATGACAGTATTCTATGATACGGATTTGT ATCACTCGATAAGTGCTCAG
Downstream 100 bases:
>100_bases CCAAAAGAGCACGGACGAACCAGAAAGCAAAAGTTCGCTCATTAATCGATGGCTGTATAGTTAATTCCTAATAGGTTTGT TATGGCTCGCAGGAAAGAAT
Product: transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein; Regulator Protein
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSDKPVSAQDKFMLRLPDGMREAIGERAKQNGRSMNSEIVQILQDAIDGEKNLTDLSLLIEKIPSNANSDEITEVFRKLV DQQNELLKKFLEQNNVMRVMLKEANKS
Sequences:
>Translated_107_residues MSDKPVSAQDKFMLRLPDGMREAIGERAKQNGRSMNSEIVQILQDAIDGEKNLTDLSLLIEKIPSNANSDEITEVFRKLV DQQNELLKKFLEQNNVMRVMLKEANKS >Mature_106_residues SDKPVSAQDKFMLRLPDGMREAIGERAKQNGRSMNSEIVQILQDAIDGEKNLTDLSLLIEKIPSNANSDEITEVFRKLVD QQNELLKKFLEQNNVMRVMLKEANKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12191; Mature: 12060
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKPVSAQDKFMLRLPDGMREAIGERAKQNGRSMNSEIVQILQDAIDGEKNLTDLSLLI CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH EKIPSNANSDEITEVFRKLVDQQNELLKKFLEQNNVMRVMLKEANKS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure SDKPVSAQDKFMLRLPDGMREAIGERAKQNGRSMNSEIVQILQDAIDGEKNLTDLSLLI CCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH EKIPSNANSDEITEVFRKLVDQQNELLKKFLEQNNVMRVMLKEANKS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA