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The map label for this gene is bdlA [H]

Identifier: 153950307

GI number: 153950307

Start: 1733652

End: 1734956

Strand: Direct

Name: bdlA [H]

Synonym: YpsIP31758_1492

Alternate gene names: 153950307

Gene position: 1733652-1734956 (Clockwise)

Preceding gene: 153946932

Following gene: 153947959

Centisome position: 36.7

GC content: 48.35

Gene sequence:

>1305_bases
ATGCTGTTTAATTTCCGCTCATCTCATGCCCCCTGGCGTGCCGAATTGACCTCAATTGATAACGCTGTCCCCATGATTAT
TTTTAAACCTGATGGCACGGTAATCCAAGTGAATAAGTTATTTTTAGCTGCCATGGGATACCAAGAGGGTGAGGTGATTG
GCAAACATCACAAAATATTTTGTGACCCACAATACGCTGCCAGTGACGCTTATCGCCGCCATTGGCAATTGCTTAATGAA
GGGCGGCCAATTAGCGATAATATTAAGCGTATCCGCAAGGATGGCAGCGTAATTTGGCTACAGGGGACCTATACACCGGT
CGTTGATCGCCAGGGTAATGTGATAGAAATCATTAAAATTGCCAGTGATGTTACTGAGCGTATTTTACAATCGCAGGAAC
ACCAAAGCTTGCTGGAGGCACTTAATCGCTCAATGGGGATGATTACCTTCACCCCCCAAGGCATTATTTTGGCTGCTAAT
GACAATTTATTAAATGTTATTGGGTATTCATTGGCAGATATTCAGCATAAGTCTCATCAGATACTCTGTCTGCCTGAGTT
TGCCCACTCCGAGGAATATCACCAGCACTGGCAGCGCTTGGCCAGTGGCGAGTTTATTATCGGCCGCTTTGAACGCCTTA
ATCGCCGTGGTGAGCGGGTATGGCTGGAGGCCAGTTATAACCCGATCATGGATAATGAAGGGAACGTTCTAAAAGTGGTG
AAAATTGCGCAGGATATTACCGCATTGATGCTGCAACAGGAGCAGGAGGAGAACCTGATCCGCGATGTCCACCATTTATC
CTTGACCACTGACCGTTCCGCTTCACAGGGGGCTGAAATTGTTCAGCAGGCAGTGCGTGGTCTGCAAGAGGTGGAATCTA
TTGCACGTGAAACCTCCGATGTGGTCAGCGATTTGGGCCGTTGCTCGCAAGAGATCGGCAGCATTGTGGAGGCTATCCGC
AAGATTTCATCACAAACCAATTTATTGGCTATCAATGCCTCGATTGAAGCGGCCCATGCCGGTGAACATGGGCGAGGGTT
TTCTGTGGTTGCGAGTGAAGTCCGCTTGTTGGCTGATCAATCGCGCAAGGCGGCGAGTGAAATCGAGCAAATGACTAAAA
CCATTCAGAATGGGGTTACCGCCGCGATCAAAGGGATGGGAACCTGTGTTGAGCAGGCGGGGGGCGGGGTGATACTGACA
CAAGATGCTGGTGAGGTGATTAATCTGGTCAATGTGGGGATGCAAGATGTGGTGAAATTAATGACCACTTTTTCTCAGGT
AAAAAATCAGCGAGCACCAGTGTGA

Upstream 100 bases:

>100_bases
GGTTTGTCAGCAGTCGGATTAATATTTCTTTTCGGGTAAAGCATGTTGATAAGCATTCCTTCTGTTTGCTGCTCAATCAT
TCATCATAAGGACTTAACCT

Downstream 100 bases:

>100_bases
CGAGCGGTGGCTATTTCTATCAAAGGATAGTGATAGTAAAGGGCCAATTGATCGCAAGGGGTAAGTGATCGTAAGGGATA
AGTGAACGAAAGGAATAAGT

Product: methyl-accepting chemotaxis transducer/sensory box protein

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MLFNFRSSHAPWRAELTSIDNAVPMIIFKPDGTVIQVNKLFLAAMGYQEGEVIGKHHKIFCDPQYAASDAYRRHWQLLNE
GRPISDNIKRIRKDGSVIWLQGTYTPVVDRQGNVIEIIKIASDVTERILQSQEHQSLLEALNRSMGMITFTPQGIILAAN
DNLLNVIGYSLADIQHKSHQILCLPEFAHSEEYHQHWQRLASGEFIIGRFERLNRRGERVWLEASYNPIMDNEGNVLKVV
KIAQDITALMLQQEQEENLIRDVHHLSLTTDRSASQGAEIVQQAVRGLQEVESIARETSDVVSDLGRCSQEIGSIVEAIR
KISSQTNLLAINASIEAAHAGEHGRGFSVVASEVRLLADQSRKAASEIEQMTKTIQNGVTAAIKGMGTCVEQAGGGVILT
QDAGEVINLVNVGMQDVVKLMTTFSQVKNQRAPV

Sequences:

>Translated_434_residues
MLFNFRSSHAPWRAELTSIDNAVPMIIFKPDGTVIQVNKLFLAAMGYQEGEVIGKHHKIFCDPQYAASDAYRRHWQLLNE
GRPISDNIKRIRKDGSVIWLQGTYTPVVDRQGNVIEIIKIASDVTERILQSQEHQSLLEALNRSMGMITFTPQGIILAAN
DNLLNVIGYSLADIQHKSHQILCLPEFAHSEEYHQHWQRLASGEFIIGRFERLNRRGERVWLEASYNPIMDNEGNVLKVV
KIAQDITALMLQQEQEENLIRDVHHLSLTTDRSASQGAEIVQQAVRGLQEVESIARETSDVVSDLGRCSQEIGSIVEAIR
KISSQTNLLAINASIEAAHAGEHGRGFSVVASEVRLLADQSRKAASEIEQMTKTIQNGVTAAIKGMGTCVEQAGGGVILT
QDAGEVINLVNVGMQDVVKLMTTFSQVKNQRAPV
>Mature_434_residues
MLFNFRSSHAPWRAELTSIDNAVPMIIFKPDGTVIQVNKLFLAAMGYQEGEVIGKHHKIFCDPQYAASDAYRRHWQLLNE
GRPISDNIKRIRKDGSVIWLQGTYTPVVDRQGNVIEIIKIASDVTERILQSQEHQSLLEALNRSMGMITFTPQGIILAAN
DNLLNVIGYSLADIQHKSHQILCLPEFAHSEEYHQHWQRLASGEFIIGRFERLNRRGERVWLEASYNPIMDNEGNVLKVV
KIAQDITALMLQQEQEENLIRDVHHLSLTTDRSASQGAEIVQQAVRGLQEVESIARETSDVVSDLGRCSQEIGSIVEAIR
KISSQTNLLAINASIEAAHAGEHGRGFSVVASEVRLLADQSRKAASEIEQMTKTIQNGVTAAIKGMGTCVEQAGGGVILT
QDAGEVINLVNVGMQDVVKLMTTFSQVKNQRAPV

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=134, Percent_Identity=39.5522388059701, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1788195, Length=168, Percent_Identity=30.952380952381, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789453, Length=106, Percent_Identity=39.622641509434, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787690, Length=146, Percent_Identity=37.6712328767123, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788194, Length=97, Percent_Identity=43.298969072165, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 48204; Mature: 48204

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFNFRSSHAPWRAELTSIDNAVPMIIFKPDGTVIQVNKLFLAAMGYQEGEVIGKHHKIF
CEECCCCCCCCCHHHHHHCCCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCEECCCCEEE
CDPQYAASDAYRRHWQLLNEGRPISDNIKRIRKDGSVIWLQGTYTPVVDRQGNVIEIIKI
ECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEHHHHH
ASDVTERILQSQEHQSLLEALNRSMGMITFTPQGIILAANDNLLNVIGYSLADIQHKSHQ
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCE
ILCLPEFAHSEEYHQHWQRLASGEFIIGRFERLNRRGERVWLEASYNPIMDNEGNVLKVV
EEEECCHHCCHHHHHHHHHHCCCCEEEHHHHHHCCCCCEEEEEECCCCCCCCCCCEEHHH
KIAQDITALMLQQEQEENLIRDVHHLSLTTDRSASQGAEIVQQAVRGLQEVESIARETSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSDLGRCSQEIGSIVEAIRKISSQTNLLAINASIEAAHAGEHGRGFSVVASEVRLLADQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHH
SRKAASEIEQMTKTIQNGVTAAIKGMGTCVEQAGGGVILTQDAGEVINLVNVGMQDVVKL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHHHHHH
MTTFSQVKNQRAPV
HHHHHHHHHCCCCC
>Mature Secondary Structure
MLFNFRSSHAPWRAELTSIDNAVPMIIFKPDGTVIQVNKLFLAAMGYQEGEVIGKHHKIF
CEECCCCCCCCCHHHHHHCCCCCCEEEECCCCCEEEEHHHHHHHCCCCCCCEECCCCEEE
CDPQYAASDAYRRHWQLLNEGRPISDNIKRIRKDGSVIWLQGTYTPVVDRQGNVIEIIKI
ECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEHHHHH
ASDVTERILQSQEHQSLLEALNRSMGMITFTPQGIILAANDNLLNVIGYSLADIQHKSHQ
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCE
ILCLPEFAHSEEYHQHWQRLASGEFIIGRFERLNRRGERVWLEASYNPIMDNEGNVLKVV
EEEECCHHCCHHHHHHHHHHCCCCEEEHHHHHHCCCCCEEEEEECCCCCCCCCCCEEHHH
KIAQDITALMLQQEQEENLIRDVHHLSLTTDRSASQGAEIVQQAVRGLQEVESIARETSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVSDLGRCSQEIGSIVEAIRKISSQTNLLAINASIEAAHAGEHGRGFSVVASEVRLLADQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCHHHHHHHHHHHHHH
SRKAASEIEQMTKTIQNGVTAAIKGMGTCVEQAGGGVILTQDAGEVINLVNVGMQDVVKL
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCHHHHHHH
MTTFSQVKNQRAPV
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]