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The map label for this gene is flgH [H]

Identifier: 153950284

GI number: 153950284

Start: 2622931

End: 2623662

Strand: Reverse

Name: flgH [H]

Synonym: YpsIP31758_2318

Alternate gene names: 153950284

Gene position: 2623662-2622931 (Counterclockwise)

Preceding gene: 153947499

Following gene: 153950706

Centisome position: 55.55

GC content: 52.46

Gene sequence:

>732_bases
ATGGATAGCGCGCCGTTCAGAACGTCAGGTGGAGTGAAAGGGATGTATTTGAGAAAAATAAGTGCGCCGTTGATGACAAT
GCTGCTACTCAATGGTTGCGCGTATATTCCGCATAAACCACTGGTGGATGGCACCACGTCTGCGCAGCCCGCACCGGCCA
GTGCGCCGTTGCCGAATGGCTCTATTTTTCAGACCGTACAGCCGATGAATTATGGCTATCAACCCCTATTTGAAGACCGT
CGCCCACGTAATATCGGTGACACGCTGACCATTACCTTGCAGGAAAATGTCAGTGCCAGCAAAAGTTCGTCAGCCAATGC
CAGCCGTAATGGGACCAGCTCATTTGGTGTGACGACCGCCCCCCGCTATTTGGACGGATTATTGGGTAATGGGCGCGCCG
ATATGGAAATCACGGGCGACAATACTTTTGGCGGCAAGGGGGGGGCGAATGCCAATAACACCTTCAGCGGCACGATCACC
GTGACGGTCGATCAAGTACTGGCTAACGGTAACTTGCATGTGGTGGGTGAAAAACAGATTGCTATCAATCAGGGGACCGA
ATTTATTCGCTTCTCTGGGGTAGTCAACCCACGCACCATCAGCGGCAGCAATAGCGTGACCTCAACACAGGTTGCCGATG
CGCGCATCGAGTATGTGGGGAATGGGTATATCAATGAAGCGCAAACCATGGGCTGGTTACAGCGGTTCTTCCTTAATGTT
TCGCCGTACTAA

Upstream 100 bases:

>100_bases
CCTGCTTTCGGGGGGCATCATGCCCCCTGATCGCCGCAGCATAATAGGTCTCTGGGCAAGTTTGCCAACCTCTTACTGGT
TATAGGATTGATAATCAAAG

Downstream 100 bases:

>100_bases
GAAGAGGCGTCCAAATGCGTAAACAGTCACTTGTCACTCTACTTATGGTCCTGCTCTCGCTGGTTTGGCTACCGGCCTCG
GCGGAGCGTATCCGCGATTT

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein 1 [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDSAPFRTSGGVKGMYLRKISAPLMTMLLLNGCAYIPHKPLVDGTTSAQPAPASAPLPNGSIFQTVQPMNYGYQPLFEDR
RPRNIGDTLTITLQENVSASKSSSANASRNGTSSFGVTTAPRYLDGLLGNGRADMEITGDNTFGGKGGANANNTFSGTIT
VTVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNV
SPY

Sequences:

>Translated_243_residues
MDSAPFRTSGGVKGMYLRKISAPLMTMLLLNGCAYIPHKPLVDGTTSAQPAPASAPLPNGSIFQTVQPMNYGYQPLFEDR
RPRNIGDTLTITLQENVSASKSSSANASRNGTSSFGVTTAPRYLDGLLGNGRADMEITGDNTFGGKGGANANNTFSGTIT
VTVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNV
SPY
>Mature_243_residues
MDSAPFRTSGGVKGMYLRKISAPLMTMLLLNGCAYIPHKPLVDGTTSAQPAPASAPLPNGSIFQTVQPMNYGYQPLFEDR
RPRNIGDTLTITLQENVSASKSSSANASRNGTSSFGVTTAPRYLDGLLGNGRADMEITGDNTFGGKGGANANNTFSGTIT
VTVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNV
SPY

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=218, Percent_Identity=80.7339449541284, Blast_Score=343, Evalue=6e-96,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 25836; Mature: 25836

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSAPFRTSGGVKGMYLRKISAPLMTMLLLNGCAYIPHKPLVDGTTSAQPAPASAPLPNG
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SIFQTVQPMNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANASRNGTSSFGVTTA
CEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PRYLDGLLGNGRADMEITGDNTFGGKGGANANNTFSGTITVTVDQVLANGNLHVVGEKQI
HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEHHHHCCCEEEEECCEE
AINQGTEFIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNV
EECCCCCEEEEECCCCCEEECCCCCCCEEEHHCEEEEEECCCCCCHHHHHHHHHHHHHCC
SPY
CCC
>Mature Secondary Structure
MDSAPFRTSGGVKGMYLRKISAPLMTMLLLNGCAYIPHKPLVDGTTSAQPAPASAPLPNG
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SIFQTVQPMNYGYQPLFEDRRPRNIGDTLTITLQENVSASKSSSANASRNGTSSFGVTTA
CEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PRYLDGLLGNGRADMEITGDNTFGGKGGANANNTFSGTITVTVDQVLANGNLHVVGEKQI
HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEHHHHCCCEEEEECCEE
AINQGTEFIRFSGVVNPRTISGSNSVTSTQVADARIEYVGNGYINEAQTMGWLQRFFLNV
EECCCCCEEEEECCCCCEEECCCCCCCEEEHHCEEEEEECCCCCCHHHHHHHHHHHHHCC
SPY
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA