| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950274
Identifier: 153950274
GI number: 153950274
Start: 389845
End: 390717
Strand: Direct
Name: 153950274
Synonym: YpsIP31758_0331
Alternate gene names: NA
Gene position: 389845-390717 (Clockwise)
Preceding gene: 153949971
Following gene: 153948437
Centisome position: 8.25
GC content: 30.58
Gene sequence:
>873_bases ATGAAAAAATTAACCTATAATGAAAATACAGGGGATCTTGAAATACCACTGGAATCCCTATCTGAGGGCCTACTCTATGC TAAGAAGAAAAGCATACACAATATAAAAATAACAAAGGCTCAAATAAGCTTAGACTATGAGTCTGCTTTTGCGTCATTAG TCGGAGATGATAATATACGGTCAATATATATTGCTGATGATGTTAATCTGAAAAAAATAAACCTTGAGCCGTTATATCAA CTAAAGAATTTAAAAAAATTAGTAATGCAATATTTAAAAGGTCGTATTGATTTTTCTAAAATATCAACTTTGGAAGCTCT TTATATAACTAAAGCAGACCAAGAAATTGATTGCCTTTCCATTTATGGGCTAGAGGAGTTGTTGCTCGTTTCAATTAAAA ACATTGATTGCAAGTTCATATCCTTATTATCAGAATTAAAAATTCTTAGAATTAGCAGCGCTAGAATAGACAATTTATCT GGTATAGAAATGCTTGATAAACTAGAGGTTATAAAACTAAGCCATTGCCCTGATCTTACTGATATATCAAGTGTTAATAA GTTGAAGGAGTTATCAAAATTATATGTTGAGAAATGTAAAGAAATAAATAGTTTCGAATTCCTTAATGAAAATAAAACTA TCAATGAATTATTTTTGTCAACTGTTAACTCTCTTTCTTTTATCCCAACTATGAAGTGTATAAAGTATCTTAAATTTTGG GAGTTAAAAGATGGGGATTTAAATTATTTGTTGAAGTCTCCTTCTCTTGAAAAAGTGGATTTTTACCCACAAAAAAAACA TTACACACATAAGAAAGAAGAGATTAACAATCTTATCGTGAGGTCGGCAAAGGCCTCCGCTGAAGGGCGTTGA
Upstream 100 bases:
>100_bases ATATGATGCCGCCGATTTGAAAACACAAAAAAAGGTTGACCGTCTAGCTAATAAATTAGATAAGAATTTTAAGTCATCTA AAGGATGTTAAGAGGGATGT
Downstream 100 bases:
>100_bases TGTCCACCCGGCGTAATCTGGCTGCGCCGGGTCGTGTCCTACGGTGAAGAAGTAGGTTACTCCTTACAGTCTCGTCAGCT CACGCCGCCCACCCTAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKKLTYNENTGDLEIPLESLSEGLLYAKKKSIHNIKITKAQISLDYESAFASLVGDDNIRSIYIADDVNLKKINLEPLYQ LKNLKKLVMQYLKGRIDFSKISTLEALYITKADQEIDCLSIYGLEELLLVSIKNIDCKFISLLSELKILRISSARIDNLS GIEMLDKLEVIKLSHCPDLTDISSVNKLKELSKLYVEKCKEINSFEFLNENKTINELFLSTVNSLSFIPTMKCIKYLKFW ELKDGDLNYLLKSPSLEKVDFYPQKKHYTHKKEEINNLIVRSAKASAEGR
Sequences:
>Translated_290_residues MKKLTYNENTGDLEIPLESLSEGLLYAKKKSIHNIKITKAQISLDYESAFASLVGDDNIRSIYIADDVNLKKINLEPLYQ LKNLKKLVMQYLKGRIDFSKISTLEALYITKADQEIDCLSIYGLEELLLVSIKNIDCKFISLLSELKILRISSARIDNLS GIEMLDKLEVIKLSHCPDLTDISSVNKLKELSKLYVEKCKEINSFEFLNENKTINELFLSTVNSLSFIPTMKCIKYLKFW ELKDGDLNYLLKSPSLEKVDFYPQKKHYTHKKEEINNLIVRSAKASAEGR >Mature_290_residues MKKLTYNENTGDLEIPLESLSEGLLYAKKKSIHNIKITKAQISLDYESAFASLVGDDNIRSIYIADDVNLKKINLEPLYQ LKNLKKLVMQYLKGRIDFSKISTLEALYITKADQEIDCLSIYGLEELLLVSIKNIDCKFISLLSELKILRISSARIDNLS GIEMLDKLEVIKLSHCPDLTDISSVNKLKELSKLYVEKCKEINSFEFLNENKTINELFLSTVNSLSFIPTMKCIKYLKFW ELKDGDLNYLLKSPSLEKVDFYPQKKHYTHKKEEINNLIVRSAKASAEGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33304; Mature: 33304
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLTYNENTGDLEIPLESLSEGLLYAKKKSIHNIKITKAQISLDYESAFASLVGDDNIR CCCEECCCCCCCEEECHHHHHCHHHHHHHCCCCEEEEEEEEEEECHHHHHHHHHCCCCCE SIYIADDVNLKKINLEPLYQLKNLKKLVMQYLKGRIDFSKISTLEALYITKADQEIDCLS EEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCEEE IYGLEELLLVSIKNIDCKFISLLSELKILRISSARIDNLSGIEMLDKLEVIKLSHCPDLT CCCHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHEEECCCCCCC DISSVNKLKELSKLYVEKCKEINSFEFLNENKTINELFLSTVNSLSFIPTMKCIKYLKFW HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELKDGDLNYLLKSPSLEKVDFYPQKKHYTHKKEEINNLIVRSAKASAEGR CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKLTYNENTGDLEIPLESLSEGLLYAKKKSIHNIKITKAQISLDYESAFASLVGDDNIR CCCEECCCCCCCEEECHHHHHCHHHHHHHCCCCEEEEEEEEEEECHHHHHHHHHCCCCCE SIYIADDVNLKKINLEPLYQLKNLKKLVMQYLKGRIDFSKISTLEALYITKADQEIDCLS EEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCCEEE IYGLEELLLVSIKNIDCKFISLLSELKILRISSARIDNLSGIEMLDKLEVIKLSHCPDLT CCCHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHEEECCCCCCC DISSVNKLKELSKLYVEKCKEINSFEFLNENKTINELFLSTVNSLSFIPTMKCIKYLKFW HHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELKDGDLNYLLKSPSLEKVDFYPQKKHYTHKKEEINNLIVRSAKASAEGR CCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA