| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is phnK [H]
Identifier: 153950180
GI number: 153950180
Start: 4024831
End: 4025619
Strand: Direct
Name: phnK [H]
Synonym: YpsIP31758_3564
Alternate gene names: 153950180
Gene position: 4024831-4025619 (Clockwise)
Preceding gene: 153948740
Following gene: 153950789
Centisome position: 85.21
GC content: 55.13
Gene sequence:
>789_bases ATGTCAGCCCAATCTACCCCTCAGCCGCTGTTGTCGGTGGAGAATCTCACTCATTTATATGCGCCGGGCAAAGGATTCAG TGATGTCTCTTTTCAGCTCTATCCCGGTGAGGTTTTGGGGATCGTCGGCGAATCCGGCTCGGGTAAAACCACCTTGCTGA AAGCTATTTCGGCCCGTTTAGCCCCACAGCAGGGGCAGATCATTTACCGCACGGGGGTACAGCAACCGGTTGATTTATAC GAAATGGCCGAAAGTCAGCGCCGCCGTTTGTTGCGTACCGAATGGGGTGTGGTACATCAGCATCCACTGGACGGCTTGCG CCCACAAGTCTCCGCGGGCGGCAACATCGGCGAACGTTTAATGGCTACCGGCCAGCGCCATTACGGCGAGATCCGCCAAC TTGCAGGCCGCTGGCTGGAAGATGTCGAAATCCCGTTATCCCGGTTGGATGACCTCCCCACCACTTTCTCCGGCGGGATG CAGCAGCGCCTGCAAATCGCCCGTAATTTGGTGACCCATCCGAAACTGGTTTTTATGGATGAACCTACGGGCGGCTTGGA TGTATCAGTGCAGGCACGTTTACTGGATTTACTGCGCAATTTGGTGGTGGAAATGCAGCTAGCCGTGGTGATTGTCACTC ATGACTTGGGGGTAGCCCGCTTATTAGCTAACCGTCTATTGGTGATGAAAGAGGGCCAGGTTATCGAAAGCGGCCTGACT GACCGGGTACTGGACGATCCCCATCACCCCTACACCCAACTCCTGGTCTCATCGGTACTGCAAAACTAA
Upstream 100 bases:
>100_bases GCCGCATGTTTGTTTGCTCGGATACTGATTTTTGCCAGCAGCAACTGGCTCAAGCCAGCGCACAAGAAGCCACATCCCCA ACCGAGGTACCTGTCTGATG
Downstream 100 bases:
>100_bases ACCACTGCTGGCTCTATTTTTGCTCTTTGATTTTGCATTTGCAGTTGGTTTTTGATTTTGACTTTTAGGCCGTTGACCTT GAACGGCGAATCGGCCAACG
Product: phosphonate C-P lyase system protein PhnK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGVQQPVDLY EMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGM QQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGLT DRVLDDPHHPYTQLLVSSVLQN
Sequences:
>Translated_262_residues MSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGVQQPVDLY EMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGM QQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGLT DRVLDDPHHPYTQLLVSSVLQN >Mature_261_residues SAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARLAPQQGQIIYRTGVQQPVDLYE MAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGERLMATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGMQ QRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGLTD RVLDDPHHPYTQLLVSSVLQN
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4107
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=28.099173553719, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=28.099173553719, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI21536376, Length=231, Percent_Identity=25.974025974026, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI42490749, Length=268, Percent_Identity=27.9850746268657, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI105990541, Length=236, Percent_Identity=29.2372881355932, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI116734710, Length=217, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI171184400, Length=248, Percent_Identity=26.2096774193548, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI48994997, Length=255, Percent_Identity=85.4901960784314, Blast_Score=435, Evalue=1e-123, Organism=Escherichia coli, GI1789963, Length=256, Percent_Identity=36.71875, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI145693107, Length=266, Percent_Identity=34.9624060150376, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789962, Length=262, Percent_Identity=34.7328244274809, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1787500, Length=237, Percent_Identity=35.8649789029536, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1787758, Length=235, Percent_Identity=37.4468085106383, Blast_Score=139, Evalue=2e-34, Organism=Escherichia coli, GI48994883, Length=263, Percent_Identity=34.6007604562738, Blast_Score=137, Evalue=8e-34, Organism=Escherichia coli, GI1788506, Length=273, Percent_Identity=35.1648351648352, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1787759, Length=257, Percent_Identity=35.0194552529183, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1789672, Length=253, Percent_Identity=30.4347826086957, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1787548, Length=262, Percent_Identity=28.2442748091603, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1786872, Length=254, Percent_Identity=31.1023622047244, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1788225, Length=252, Percent_Identity=31.7460317460317, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1789891, Length=238, Percent_Identity=30.672268907563, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1787029, Length=239, Percent_Identity=30.5439330543933, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=34.061135371179, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786398, Length=262, Percent_Identity=26.3358778625954, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789032, Length=249, Percent_Identity=27.710843373494, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI87081791, Length=261, Percent_Identity=28.3524904214559, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1787089, Length=229, Percent_Identity=29.2576419213974, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787792, Length=243, Percent_Identity=29.6296296296296, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1788761, Length=241, Percent_Identity=29.4605809128631, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789864, Length=246, Percent_Identity=27.2357723577236, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787547, Length=260, Percent_Identity=26.9230769230769, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788644, Length=258, Percent_Identity=29.8449612403101, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=29.9145299145299, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786703, Length=211, Percent_Identity=35.0710900473934, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1790525, Length=254, Percent_Identity=26.3779527559055, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1790190, Length=232, Percent_Identity=28.0172413793103, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=26.4957264957265, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1789991, Length=242, Percent_Identity=28.5123966942149, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790534, Length=199, Percent_Identity=33.1658291457286, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1790162, Length=266, Percent_Identity=27.0676691729323, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1790739, Length=242, Percent_Identity=30.1652892561983, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1787712, Length=252, Percent_Identity=26.984126984127, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1787164, Length=231, Percent_Identity=29.8701298701299, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=28.3842794759825, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787105, Length=242, Percent_Identity=31.8181818181818, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI48995001, Length=239, Percent_Identity=28.0334728033473, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1786563, Length=220, Percent_Identity=30.9090909090909, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787370, Length=261, Percent_Identity=23.3716475095785, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789751, Length=231, Percent_Identity=26.8398268398268, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788210, Length=241, Percent_Identity=27.3858921161826, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1788897, Length=233, Percent_Identity=26.6094420600858, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788450, Length=258, Percent_Identity=25.5813953488372, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1790467, Length=252, Percent_Identity=25.3968253968254, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786803, Length=235, Percent_Identity=27.6595744680851, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1786345, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=27.3148148148148, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI87082268, Length=238, Percent_Identity=26.890756302521, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=23.9130434782609, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI87081782, Length=255, Percent_Identity=26.2745098039216, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1789593, Length=241, Percent_Identity=26.1410788381743, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786981, Length=206, Percent_Identity=32.5242718446602, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786319, Length=234, Percent_Identity=24.3589743589744, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1788053, Length=213, Percent_Identity=28.169014084507, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI87082267, Length=240, Percent_Identity=26.25, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1788472, Length=256, Percent_Identity=23.828125, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115533608, Length=242, Percent_Identity=26.0330578512397, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI193202349, Length=224, Percent_Identity=27.6785714285714, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71984940, Length=220, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17543740, Length=240, Percent_Identity=25.8333333333333, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115534520, Length=241, Percent_Identity=24.896265560166, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25146777, Length=247, Percent_Identity=27.9352226720648, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17558664, Length=215, Percent_Identity=26.046511627907, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=256, Percent_Identity=20.703125, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322640, Length=250, Percent_Identity=28.8, Blast_Score=76, Evalue=6e-15, Organism=Drosophila melanogaster, GI24641565, Length=225, Percent_Identity=27.5555555555556, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI23397593, Length=248, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24643674, Length=207, Percent_Identity=25.6038647342995, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI116007184, Length=245, Percent_Identity=27.3469387755102, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221500365, Length=245, Percent_Identity=27.3469387755102, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012700 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 28931; Mature: 28800
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARL CCCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHC APQQGQIIYRTGVQQPVDLYEMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGERL CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH MATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGMQQRLQIARNLVTHPKLVFMD HHHCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE EPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGLT CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCC DRVLDDPHHPYTQLLVSSVLQN HHHCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SAQSTPQPLLSVENLTHLYAPGKGFSDVSFQLYPGEVLGIVGESGSGKTTLLKAISARL CCCCCCCHHHHHHHHHHEECCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHC APQQGQIIYRTGVQQPVDLYEMAESQRRRLLRTEWGVVHQHPLDGLRPQVSAGGNIGERL CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH MATGQRHYGEIRQLAGRWLEDVEIPLSRLDDLPTTFSGGMQQRLQIARNLVTHPKLVFMD HHHCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE EPTGGLDVSVQARLLDLLRNLVVEMQLAVVIVTHDLGVARLLANRLLVMKEGQVIESGLT CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCC DRVLDDPHHPYTQLLVSSVLQN HHHCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]