| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950172
Identifier: 153950172
GI number: 153950172
Start: 2773041
End: 2773871
Strand: Reverse
Name: 153950172
Synonym: YpsIP31758_2456
Alternate gene names: NA
Gene position: 2773871-2773041 (Counterclockwise)
Preceding gene: 153946884
Following gene: 153947081
Centisome position: 58.73
GC content: 36.22
Gene sequence:
>831_bases ATGGGTAAGATTAGCACTCTATGTAAATCAAGAAGGGATGAGACACATATAACATGGCTAAATTCCAAAAACCATAATAA TGATACTGCCTATTTTTATATATCGCGCAGTGATTTTTTATTAATTTTTATCCGATATTTATTCATATTAATTGTTCTTA TTATCGTCTTGGCCGTATTATTACCTGAATCACACGATGAGTTATTACATGCACTTATCCGCCTTTTACCTGCGACTTTG TCACTGGTCCTGCTGCTGCCCTGTGCCGCGCGCCTTGCTAGTCAACGGTTGAGCCAGTATCTATTGGTTTTTCACCTTTT CCCGTTGATCACTTGTTTTTCACTGAATCCATTAACCATACCTTTATCTGGGGCATTTTTACTTTATCTTATATTTATTA ATATTTATGTCGATACGCCCCCGAGTTGTGAACGTAAGAAACAGCAGTCCAATATATTACCTCACGAGTATCCGGTTGGT TTAACACTACTTTGCTTTAGTGGGTTATATCTGACTTTTTTTGTGTGGTTTGATCTAGATGATGCGATTATCTTTTTGAT GTCGTTATCGTGGCTTTTCTTTTTACTGTCCAAGTGGCGCTGGCAAGTTGTGGCATTAAATGCATTAGGCGGTGTTGGGT TGTTTTGGTTTTTTTCCTCTGGTTTTGTGGACATAAAGTATCATAAAAATATTATTGTTCGTGCTCTAATTAAAATATCT TTACTGGACAGTTTGTTATTTATTATTTTCTCATTAAGCTTATTTATCAATATGTTATTTTGGTTGGAGGAGTGGCAGCG CACACGGCAACCATTAAAAAAAGATGAGTGA
Upstream 100 bases:
>100_bases AATAGATGTCAAATAGCGCGTGAAAGCGCTCGTTCATCTGTGTATTTTCTTTGCTTTTGTTAAATAAATGACTAATGATG TTTAAAGGATTAAAGTCACC
Downstream 100 bases:
>100_bases GACATTTTTCGTTGGAAATGACGGGTTTCAATCATAAAAATGCCGGTAGGGTTACCCCAGACCGGCATTTTGTTCTTTAA GGATCTTTCAGTTATCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGKISTLCKSRRDETHITWLNSKNHNNDTAYFYISRSDFLLIFIRYLFILIVLIIVLAVLLPESHDELLHALIRLLPATL SLVLLLPCAARLASQRLSQYLLVFHLFPLITCFSLNPLTIPLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVG LTLLCFSGLYLTFFVWFDLDDAIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSGFVDIKYHKNIIVRALIKIS LLDSLLFIIFSLSLFINMLFWLEEWQRTRQPLKKDE
Sequences:
>Translated_276_residues MGKISTLCKSRRDETHITWLNSKNHNNDTAYFYISRSDFLLIFIRYLFILIVLIIVLAVLLPESHDELLHALIRLLPATL SLVLLLPCAARLASQRLSQYLLVFHLFPLITCFSLNPLTIPLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVG LTLLCFSGLYLTFFVWFDLDDAIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSGFVDIKYHKNIIVRALIKIS LLDSLLFIIFSLSLFINMLFWLEEWQRTRQPLKKDE >Mature_275_residues GKISTLCKSRRDETHITWLNSKNHNNDTAYFYISRSDFLLIFIRYLFILIVLIIVLAVLLPESHDELLHALIRLLPATLS LVLLLPCAARLASQRLSQYLLVFHLFPLITCFSLNPLTIPLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVGL TLLCFSGLYLTFFVWFDLDDAIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSGFVDIKYHKNIIVRALIKISL LDSLLFIIFSLSLFINMLFWLEEWQRTRQPLKKDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32173; Mature: 32042
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKISTLCKSRRDETHITWLNSKNHNNDTAYFYISRSDFLLIFIRYLFILIVLIIVLAVL CCCHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH LPESHDELLHALIRLLPATLSLVLLLPCAARLASQRLSQYLLVFHLFPLITCFSLNPLTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE PLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVGLTLLCFSGLYLTFFVWFDLD CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH DAIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSGFVDIKYHKNIIVRALIKIS HHHHHHHHHHHHHHHHHHHHHEEEEEEHHCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHH LLDSLLFIIFSLSLFINMLFWLEEWQRTRQPLKKDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GKISTLCKSRRDETHITWLNSKNHNNDTAYFYISRSDFLLIFIRYLFILIVLIIVLAVL CCHHHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH LPESHDELLHALIRLLPATLSLVLLLPCAARLASQRLSQYLLVFHLFPLITCFSLNPLTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE PLSGAFLLYLIFINIYVDTPPSCERKKQQSNILPHEYPVGLTLLCFSGLYLTFFVWFDLD CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCH DAIIFLMSLSWLFFLLSKWRWQVVALNALGGVGLFWFFSSGFVDIKYHKNIIVRALIKIS HHHHHHHHHHHHHHHHHHHHHEEEEEEHHCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHH LLDSLLFIIFSLSLFINMLFWLEEWQRTRQPLKKDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA