| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950139
Identifier: 153950139
GI number: 153950139
Start: 1928909
End: 1929298
Strand: Direct
Name: 153950139
Synonym: YpsIP31758_1659
Alternate gene names: NA
Gene position: 1928909-1929298 (Clockwise)
Preceding gene: 153947004
Following gene: 153950580
Centisome position: 40.84
GC content: 47.95
Gene sequence:
>390_bases ATGGCTACACTCCCACAGAAATATGAAGACGTTGAACGTTGGGCATTTGGTGATACTGAGCAGGTTGCGGATGAGTTATT GGCATTGGTACTGAATGGCACCAAAACGGCGACCTGTGCAGCATTGGATGACGAGGGGGTTCCTCAGGCGGGTGACATAT TTGTCGTGGTTAATGGCCGGAATCAGCCAGCATGTGCGGTAGAGTTAACCGAGGTGGAACTGAAAACGTTTGATCAAGTT GATGAGGCGCATGCACTGGCGGAAGGTGAAGGCGATAGTACACTGGCTTACTGGCGTAAAACTCAACAACGCTTTTTCGA GGAGTATGATATGTTCTCCCCAGATATGATGCTGATCTGTATGAAGTTTAAAGTACTGGAAACCTTCTGA
Upstream 100 bases:
>100_bases GGAAATTTATGCTGATGCGAGAGTTAGTCAGTTCGTGCTGATTAATATAAAGTGTAATATGCGCTGCATCAATAATATTA CGAATAGGAATAATTAGATT
Downstream 100 bases:
>100_bases TGCTGTATCAGGCCGTTGTTTTAGTCCGTTAGCTTCGCCACGTTCCAAGAGAAGAAACCGTCACTCATAAGCATGAACTA TGGGTTGACGGATCTTCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQV DEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF
Sequences:
>Translated_129_residues MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQV DEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF >Mature_128_residues ATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGRNQPACAVELTEVELKTFDQVD EAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLICMKFKVLETF
Specific function: Unknown
COG id: COG4405
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14509; Mature: 14378
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGR CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECC NQPACAVELTEVELKTFDQVDEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLIC CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MKFKVLETF HHHHHHHCC >Mature Secondary Structure ATLPQKYEDVERWAFGDTEQVADELLALVLNGTKTATCAALDDEGVPQAGDIFVVVNGR CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEECC NQPACAVELTEVELKTFDQVDEAHALAEGEGDSTLAYWRKTQQRFFEEYDMFSPDMMLIC CCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH MKFKVLETF HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA