| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950129
Identifier: 153950129
GI number: 153950129
Start: 2389908
End: 2390306
Strand: Reverse
Name: 153950129
Synonym: YpsIP31758_2078
Alternate gene names: NA
Gene position: 2390306-2389908 (Counterclockwise)
Preceding gene: 153947525
Following gene: 153950279
Centisome position: 50.61
GC content: 41.1
Gene sequence:
>399_bases ATGTCAGCGATTGAACAGTTATCTTATTATCAAAAAAAATTGGCTTATGAAACAGACTCATGGGATCTGTATCTGGCATT AAAGAACAACGAAAATGTCGTTGTGGTCGATGGACGCAGTAAAGAGGTGTACCAGAGGGAACATATTCCGGGAGCTATCA ACCAGCCTCACAAAGAAATCTGTTTTAATAACACTGAAAAGTTAGATAAAACAAAAATATATATCTGCTACTGTGATGGT ATTGGTTGTAATGCTTCTACCAAAACCGCGATGAAATTGATGACGCTGGGCTTTCAGGTAAAAGAATTGTTGGGAGGTCT GGACTGGTGGAAACGCGATGGTTATTCCACTGAGGGTATCGAGGGGAAAGAAGGTACACCGATTTCCTGCGGTTGCTGA
Upstream 100 bases:
>100_bases CTGTATGCCGGCAAACTCGCCAGTTCCCGCCAAGCCGTTGAACAGATTGCTGCGGCGTTGGATATTGAGCACAAATTTCC CTGTAAACAATGAGGTTATT
Downstream 100 bases:
>100_bases GGATCCGGATATAGACCTGTCCTGATATAGGTTGACACTTTTTTGCCTTAAAACGCCTGATGAACTTCATCGGGCGTTTT GTATTTTAACGACAGATGAG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase Protein; Rhodanese-Like Domain-Containing Protein; Transcriptional Regulator AraC Family; Sulfurtransferase; Rhodanese Protein; Rhodanese Sulfurtransferase; Rhodanese Domain Sulfurtransferase; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSAIEQLSYYQKKLAYETDSWDLYLALKNNENVVVVDGRSKEVYQREHIPGAINQPHKEICFNNTEKLDKTKIYICYCDG IGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC
Sequences:
>Translated_132_residues MSAIEQLSYYQKKLAYETDSWDLYLALKNNENVVVVDGRSKEVYQREHIPGAINQPHKEICFNNTEKLDKTKIYICYCDG IGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC >Mature_131_residues SAIEQLSYYQKKLAYETDSWDLYLALKNNENVVVVDGRSKEVYQREHIPGAINQPHKEICFNNTEKLDKTKIYICYCDGI GCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGIEGKEGTPISCGC
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14942; Mature: 14811
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIEQLSYYQKKLAYETDSWDLYLALKNNENVVVVDGRSKEVYQREHIPGAINQPHKEI CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHCCCCCCCCCHHHH CFNNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGI HCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCC EGKEGTPISCGC CCCCCCCCCCCC >Mature Secondary Structure SAIEQLSYYQKKLAYETDSWDLYLALKNNENVVVVDGRSKEVYQREHIPGAINQPHKEI CHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHCCCCCCCCCHHHH CFNNTEKLDKTKIYICYCDGIGCNASTKTAMKLMTLGFQVKELLGGLDWWKRDGYSTEGI HCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCC EGKEGTPISCGC CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA