| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950120
Identifier: 153950120
GI number: 153950120
Start: 3937615
End: 3938745
Strand: Reverse
Name: 153950120
Synonym: YpsIP31758_3490
Alternate gene names: NA
Gene position: 3938745-3937615 (Counterclockwise)
Preceding gene: 153947382
Following gene: 153947027
Centisome position: 83.39
GC content: 44.83
Gene sequence:
>1131_bases ATGGGTGAAAATATTTGGGTATGGCAGCAAAAGAAATGGCCCAATTTTTATTGGGATGAGGCGCTTATTCAGCCACAGTT GCGTCATGCCAGATTTAAACTCGGGCAACTCCTTGGCGAGAACCGGACGAATACCTCGGCAGAAAACGCGACCAAAACAT TAGATATATTATTGGCAAATATTATTGCTTCATCAAAAATCGAAAATGAACCACTGAATATAAGATCGGTACGGTCATCT CTGGCGAAGCGGCTGGGTATGATTTTAGAGGATAATTATCCAACGTCAGATCGAACCGATGGTTTGGCCGCTATGATGCT GGACGCCATTAATGAGTGTAAGGCAGATTTAACACTTGAGCGGTTGTATCAATGGCATGAATGGCTTTTTCCTAATGATT TATGGTCGCTCACCCCGATGAAGGCTGGCCAATTACGGGGGCAGGAGCCTATGCAAGTTGTTTCAGGCCGTATAGGGAAA GAAACCGTTCATTTTGAAGCACCGCCGCAAGCAATCCTGTTTGATGAAATAGAGCAATTCATCAGTTGGTTTAATTTATC CCGCAGCGATAGCTTTCTTGACCCGCTGTTACGCGCTGCAATTGTACATTTTTGGTTTGTCACTTTGCACCCCTTTGAGG ATGGTAACGGGCGCATCACTCGGGCGCTTACTGATATGGCATTATCACAGGCAGATAGTCAAAGTATTCACCTTTATGCG ATGTCAGTAGCGATCCTTGATAATCGAGAAGCGTATTACGCCATTTTGGAACAGGGGCAACGTGGCAATCTGGATATCAC TCCATGGTTGTTATGGTTTATTGCCACTTTGGAGCAGAGTCTGGATCAGGCTTCAAAAGGTATTGAACATACCTTAGCTA AAACCTCTTTTTGGTTAAAACATAATGGCAGTGGATTGAGTCCGGAACAGGTAAAAGTGCTTAATCGCCTATTAGATGGC GGTGAGAATGGCTTTTCTGCTGGGATCAATGCGTCACAATATCAGAAAGTCGCAAAGGTGAGTAAAGCAACAGCCACGCG TCATCTTGCTGATTTACTGGCACGTGAATGTATTGAAAAACTGCCGGGCGGTGGACGAAACACGCGGTATCAGGTGAAAT ACCCTGACTAA
Upstream 100 bases:
>100_bases GCTGGATATCATCACATGAGCCGAATATACTGGCTATTCGGCTCACCAAATGAGCCGAATAATGAGGCTAATCGGCTCAC TCTCCGGTTGGGAGATCACT
Downstream 100 bases:
>100_bases AAAGGCCTGCGATTGCAGGCCCTTCTATCTGTCAGGCTACTATCCGTCAGACTTCTACCCGCCAGCCACTTACTGATGTA AATGGCTGGGAATGTACTCA
Product: Fic family protein
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic; Cell Filamentation Protein; Fic Protein Family; Filamentation Induced By CAMP Protein Family Protein; -Like Protein; Homolog; Transcription Regulator; AsnC Family Regulatory Protein
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MGENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRTNTSAENATKTLDILLANIIASSKIENEPLNIRSVRSS LAKRLGMILEDNYPTSDRTDGLAAMMLDAINECKADLTLERLYQWHEWLFPNDLWSLTPMKAGQLRGQEPMQVVSGRIGK ETVHFEAPPQAILFDEIEQFISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRALTDMALSQADSQSIHLYA MSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQASKGIEHTLAKTSFWLKHNGSGLSPEQVKVLNRLLDG GENGFSAGINASQYQKVAKVSKATATRHLADLLARECIEKLPGGGRNTRYQVKYPD
Sequences:
>Translated_376_residues MGENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRTNTSAENATKTLDILLANIIASSKIENEPLNIRSVRSS LAKRLGMILEDNYPTSDRTDGLAAMMLDAINECKADLTLERLYQWHEWLFPNDLWSLTPMKAGQLRGQEPMQVVSGRIGK ETVHFEAPPQAILFDEIEQFISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRALTDMALSQADSQSIHLYA MSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQASKGIEHTLAKTSFWLKHNGSGLSPEQVKVLNRLLDG GENGFSAGINASQYQKVAKVSKATATRHLADLLARECIEKLPGGGRNTRYQVKYPD >Mature_375_residues GENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRTNTSAENATKTLDILLANIIASSKIENEPLNIRSVRSSL AKRLGMILEDNYPTSDRTDGLAAMMLDAINECKADLTLERLYQWHEWLFPNDLWSLTPMKAGQLRGQEPMQVVSGRIGKE TVHFEAPPQAILFDEIEQFISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRALTDMALSQADSQSIHLYAM SVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQASKGIEHTLAKTSFWLKHNGSGLSPEQVKVLNRLLDGG ENGFSAGINASQYQKVAKVSKATATRHLADLLARECIEKLPGGGRNTRYQVKYPD
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42655; Mature: 42524
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRTNTSAENATKTLDILLAN CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH IIASSKIENEPLNIRSVRSSLAKRLGMILEDNYPTSDRTDGLAAMMLDAINECKADLTLE HHHHHCCCCCCCHHHHHHHHHHHHHCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RLYQWHEWLFPNDLWSLTPMKAGQLRGQEPMQVVSGRIGKETVHFEAPPQAILFDEIEQF HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHH ISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRALTDMALSQADSQSIHLYA HHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE MSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQASKGIEHTLAKTSFWLK EEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE HNGSGLSPEQVKVLNRLLDGGENGFSAGINASQYQKVAKVSKATATRHLADLLARECIEK ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGGGRNTRYQVKYPD CCCCCCCCEEEEECCC >Mature Secondary Structure GENIWVWQQKKWPNFYWDEALIQPQLRHARFKLGQLLGENRTNTSAENATKTLDILLAN CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH IIASSKIENEPLNIRSVRSSLAKRLGMILEDNYPTSDRTDGLAAMMLDAINECKADLTLE HHHHHCCCCCCCHHHHHHHHHHHHHCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RLYQWHEWLFPNDLWSLTPMKAGQLRGQEPMQVVSGRIGKETVHFEAPPQAILFDEIEQF HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHH ISWFNLSRSDSFLDPLLRAAIVHFWFVTLHPFEDGNGRITRALTDMALSQADSQSIHLYA HHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE MSVAILDNREAYYAILEQGQRGNLDITPWLLWFIATLEQSLDQASKGIEHTLAKTSFWLK EEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE HNGSGLSPEQVKVLNRLLDGGENGFSAGINASQYQKVAKVSKATATRHLADLLARECIEK ECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPGGGRNTRYQVKYPD CCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA