| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is ppsA [H]
Identifier: 153950097
GI number: 153950097
Start: 2006178
End: 2008562
Strand: Direct
Name: ppsA [H]
Synonym: YpsIP31758_1737
Alternate gene names: 153950097
Gene position: 2006178-2008562 (Clockwise)
Preceding gene: 153948973
Following gene: 153949009
Centisome position: 42.47
GC content: 50.15
Gene sequence:
>2385_bases ATGTCCAACAATGGCCACACCCGCTGTAATGTGCTTTGGTACAACCAGCTTGGCATGCACGATGTTGACCGCGTAGGGGG TAAAAATGCCTCCCTGGGTGAAATGATAACTCATCTTTCTGAACTGGGCGTTTCTGTGCCCAATGGCTTTGCTACCACAG CTCAGGCGTTTAACGACTTTCTGGAGCAAAGTGGTGTCAACCAACGGATTTATCAATTATTGGATAATACCAATATTGAC GATATCGCAGAATTATCCAAAGCGGGCGCTCAGATCCGCCAATGGGTTATTGAGACGCCGTTCCATCCAGAGTTCGAACA ATCAATTTATGACGCTTATAAGCAATTAGCTGACGGCGAACCTGAGGCATCATTTGCTGTTCGCTCTTCTGCGACAGCAG AAGATATGCCGGATGCTTCCTTTGCTGGGCAACAAGAGACATTTCTTAATGTACAGGGCATTGATGCGATAATGGTCGCA ATTAAGCACGTGTTCGCTTCACTGTTTAATGACCGGGCTATTTCTTATCGTGTGCATCAGGGGTACGACCACCGCGGCGT AGCATTGTCTGCCGGCGTACAACGGATGGTGCGTTCTGATCTTGCGTCTTCGGGCGTGATGTTCACGATTGATACCGAGT CTGGTTTTGATCAAGTGGTCTTTATCACCGCAGCGCATGGTCTGGGAGAAATGGTGGTACAGGGGGCGGTTAACCCTGAT GAATTCTATGTACACAAACCCACATTGCGTAACGGTAAACCGGCCATCGTGCGGCGCAATATGGGGTCCAAAAAAATTCG GATGATATACGCCGAGAACCAAGAACATGGCAAGCAGGTGTGTATTGAAGATGTGCCAGAAATACAACGCAATCGTTTCG CTCTCAGTGATGATGAAGTAGAAGCATTGGCCCATCAGGCGCTGTTGATTGAAGAACATTATGGCCGCCCAATGGATATC GAGTGGGCCAAAGATGGTCATACGGGGCAGTTGTTTATCGTGCAGGCCCGCCCGGAAACCGTGCGTTCCAATGAGCAGGT GATGGAACGCTACCAGTTGAATAATCAAAGTAATGTGCTGGTGGAAGGCCGTGCTATCGGTCATCGTATTGGCGCGGGTC CGGTCAAGGTTATTCATGACATCAGTGAGATGGATCGAATTCAGGCGGGTGATGTCCTGGTGACGGATATGACTGACCCC GATTGGGAGCCGATCATGAAAAAGGCCTCAGCCATTGTTACCAACCGTGGTGGGCGTACCTGCCATGCCGCGATTATTGC CCGTGAATTGGGGATACCTGCGGTGGTCGGTTGTGGTAATGCAACCGAGCTATTGAAAGAGGGCCAAAATGTTACCGTCT CCTGTGCTGAGGGGGATACGGGTTACGTTTATCACGAGCTACTGGACTTCTCGGTTCAAAGTTCGCAAGTCACTGAACTG CCTGATTTACCGTTAAAAATCATGATGAATGTTGGCAACCCGGACCGGGCTTTTGATTTCGCCCGTTTACCTAATGAAGG GGTCGGTCTGGCGCGGCTGGAGTTTATTATCAATCGGATGATTGGTGTGCATCCCAAAGCTCTTCTGGAGTTTGATCAGC AGGAGCCTGCGCTACAGGCTGAAATCAAAGCGTTGATGCATGGCTATGACGACCCGGTCGAGTTCTATATTGGTCGCCTG ACCGAGGGGATCGCTACATTGGGGGCGGCATTTTGGCCAAAACCGGTGATTGTTCGGTTGTCTGACTTTAAGTCTAATGA GTATGCCAATCTGGTGGGGGGCGCGGGTTATGAACCGCACGAAGAGAACCCAATGCTAGGTTTCCGTGGCGCGGGGCGCT ATGTCTCTGATCACTTCCGTGATTGCTTCGCTCTGGAATGTGAGGCGATGAAGCGAGTGCGCAATGTGATGGGGTTGACT AACGTCGAAGTGATGGTGCCTTTTGTGCGGACGGTGGCGCAAGCGGAGGCCGTAGTGGCCGAACTGGCAAGGCAAGGATT GAAGCGCGGTGAGAATGGTCTGAAGATCATCATGATGTGTGAAATTCCTTCTAATGCATTGCTGGCAGAACAGTTCCTTG AGCATTTTGATGGTTTCTCCATTGGTTCCAATGATATGACTCAATTGACACTGGGGCTGGATCGTGATTCTGGCGTGGTA TCGGCGTTGTTTGATGAGCGCAATGAGGCAGTAAAAGCGTTGTTATCAATGGCAATCCAAGCGGCTAAACGTCACGGTAA ATATGTCGGGATTTGTGGTCAAGGTCCGTCAGACCATGAAGATTTCGCTCTGTGGTTAATGGAACAGGGGATCGACAGCT TGTCTCTTAATCCAGATACCGTAGTGAAAACTTGGCTGAGCTTGGCGCAACACACCAAACATTGA
Upstream 100 bases:
>100_bases CGGCGATGTAATAACTAATCGACGGTGTAATAACTAATCGGCGATGTAATAACTAATCGGCGATGTAATAACTAATCGAC AATGTAAAAGGATTGTTTCG
Downstream 100 bases:
>100_bases TCACTCAGGGTTAGGGATGAGTGTTTGTTTGTGAGAGTGAATGTGAGTGTTCATTGAGACGAGTATTTATAGGTATTCAT CATCCGCAGCTTAGGTTGCG
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 794; Mature: 793
Protein sequence:
>794_residues MSNNGHTRCNVLWYNQLGMHDVDRVGGKNASLGEMITHLSELGVSVPNGFATTAQAFNDFLEQSGVNQRIYQLLDNTNID DIAELSKAGAQIRQWVIETPFHPEFEQSIYDAYKQLADGEPEASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAIMVA IKHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFTIDTESGFDQVVFITAAHGLGEMVVQGAVNPD EFYVHKPTLRNGKPAIVRRNMGSKKIRMIYAENQEHGKQVCIEDVPEIQRNRFALSDDEVEALAHQALLIEEHYGRPMDI EWAKDGHTGQLFIVQARPETVRSNEQVMERYQLNNQSNVLVEGRAIGHRIGAGPVKVIHDISEMDRIQAGDVLVTDMTDP DWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKEGQNVTVSCAEGDTGYVYHELLDFSVQSSQVTEL PDLPLKIMMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGVHPKALLEFDQQEPALQAEIKALMHGYDDPVEFYIGRL TEGIATLGAAFWPKPVIVRLSDFKSNEYANLVGGAGYEPHEENPMLGFRGAGRYVSDHFRDCFALECEAMKRVRNVMGLT NVEVMVPFVRTVAQAEAVVAELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEHFDGFSIGSNDMTQLTLGLDRDSGVV SALFDERNEAVKALLSMAIQAAKRHGKYVGICGQGPSDHEDFALWLMEQGIDSLSLNPDTVVKTWLSLAQHTKH
Sequences:
>Translated_794_residues MSNNGHTRCNVLWYNQLGMHDVDRVGGKNASLGEMITHLSELGVSVPNGFATTAQAFNDFLEQSGVNQRIYQLLDNTNID DIAELSKAGAQIRQWVIETPFHPEFEQSIYDAYKQLADGEPEASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAIMVA IKHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFTIDTESGFDQVVFITAAHGLGEMVVQGAVNPD EFYVHKPTLRNGKPAIVRRNMGSKKIRMIYAENQEHGKQVCIEDVPEIQRNRFALSDDEVEALAHQALLIEEHYGRPMDI EWAKDGHTGQLFIVQARPETVRSNEQVMERYQLNNQSNVLVEGRAIGHRIGAGPVKVIHDISEMDRIQAGDVLVTDMTDP DWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKEGQNVTVSCAEGDTGYVYHELLDFSVQSSQVTEL PDLPLKIMMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGVHPKALLEFDQQEPALQAEIKALMHGYDDPVEFYIGRL TEGIATLGAAFWPKPVIVRLSDFKSNEYANLVGGAGYEPHEENPMLGFRGAGRYVSDHFRDCFALECEAMKRVRNVMGLT NVEVMVPFVRTVAQAEAVVAELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEHFDGFSIGSNDMTQLTLGLDRDSGVV SALFDERNEAVKALLSMAIQAAKRHGKYVGICGQGPSDHEDFALWLMEQGIDSLSLNPDTVVKTWLSLAQHTKH >Mature_793_residues SNNGHTRCNVLWYNQLGMHDVDRVGGKNASLGEMITHLSELGVSVPNGFATTAQAFNDFLEQSGVNQRIYQLLDNTNIDD IAELSKAGAQIRQWVIETPFHPEFEQSIYDAYKQLADGEPEASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAIMVAI KHVFASLFNDRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFTIDTESGFDQVVFITAAHGLGEMVVQGAVNPDE FYVHKPTLRNGKPAIVRRNMGSKKIRMIYAENQEHGKQVCIEDVPEIQRNRFALSDDEVEALAHQALLIEEHYGRPMDIE WAKDGHTGQLFIVQARPETVRSNEQVMERYQLNNQSNVLVEGRAIGHRIGAGPVKVIHDISEMDRIQAGDVLVTDMTDPD WEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKEGQNVTVSCAEGDTGYVYHELLDFSVQSSQVTELP DLPLKIMMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGVHPKALLEFDQQEPALQAEIKALMHGYDDPVEFYIGRLT EGIATLGAAFWPKPVIVRLSDFKSNEYANLVGGAGYEPHEENPMLGFRGAGRYVSDHFRDCFALECEAMKRVRNVMGLTN VEVMVPFVRTVAQAEAVVAELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEHFDGFSIGSNDMTQLTLGLDRDSGVVS ALFDERNEAVKALLSMAIQAAKRHGKYVGICGQGPSDHEDFALWLMEQGIDSLSLNPDTVVKTWLSLAQHTKH
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=793, Percent_Identity=83.6065573770492, Blast_Score=1387, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=430, Percent_Identity=27.4418604651163, Blast_Score=121, Evalue=2e-28, Organism=Escherichia coli, GI1788726, Length=191, Percent_Identity=32.9842931937173, Blast_Score=100, Evalue=6e-22, Organism=Escherichia coli, GI48994992, Length=190, Percent_Identity=30, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1789193, Length=405, Percent_Identity=24.9382716049383, Blast_Score=84, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17564524, Length=330, Percent_Identity=26.969696969697, Blast_Score=83, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87697; Mature: 87566
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNGHTRCNVLWYNQLGMHDVDRVGGKNASLGEMITHLSELGVSVPNGFATTAQAFNDF CCCCCCEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LEQSGVNQRIYQLLDNTNIDDIAELSKAGAQIRQWVIETPFHPEFEQSIYDAYKQLADGE HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC PEASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAIMVAIKHVFASLFNDRAISYRVHQ CCCCEEECCCCCCCCCCCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEC GYDHRGVALSAGVQRMVRSDLASSGVMFTIDTESGFDQVVFITAAHGLGEMVVQGAVNPD CCCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHCCCCCC EFYVHKPTLRNGKPAIVRRNMGSKKIRMIYAENQEHGKQVCIEDVPEIQRNRFALSDDEV CEEEECCCCCCCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHH EALAHQALLIEEHYGRPMDIEWAKDGHTGQLFIVQARPETVRSNEQVMERYQLNNQSNVL HHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCCCEE VEGRAIGHRIGAGPVKVIHDISEMDRIQAGDVLVTDMTDPDWEPIMKKASAIVTNRGGRT EECHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC CHAAIIARELGIPAVVGCGNATELLKEGQNVTVSCAEGDTGYVYHELLDFSVQSSQVTEL HHHHHHHHHCCCCEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCC PDLPLKIMMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGVHPKALLEFDQQEPALQA CCCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHH EIKALMHGYDDPVEFYIGRLTEGIATLGAAFWPKPVIVRLSDFKSNEYANLVGGAGYEPH HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCC EENPMLGFRGAGRYVSDHFRDCFALECEAMKRVRNVMGLTNVEVMVPFVRTVAQAEAVVA CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEHFDGFSIGSNDMTQLTLGLDRDSGVV HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHH SALFDERNEAVKALLSMAIQAAKRHGKYVGICGQGPSDHEDFALWLMEQGIDSLSLNPDT HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHH VVKTWLSLAQHTKH HHHHHHHHHHHCCC >Mature Secondary Structure SNNGHTRCNVLWYNQLGMHDVDRVGGKNASLGEMITHLSELGVSVPNGFATTAQAFNDF CCCCCEEEEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LEQSGVNQRIYQLLDNTNIDDIAELSKAGAQIRQWVIETPFHPEFEQSIYDAYKQLADGE HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC PEASFAVRSSATAEDMPDASFAGQQETFLNVQGIDAIMVAIKHVFASLFNDRAISYRVHQ CCCCEEECCCCCCCCCCCCCCCCCCHHEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEC GYDHRGVALSAGVQRMVRSDLASSGVMFTIDTESGFDQVVFITAAHGLGEMVVQGAVNPD CCCCCCEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHCCCCCC EFYVHKPTLRNGKPAIVRRNMGSKKIRMIYAENQEHGKQVCIEDVPEIQRNRFALSDDEV CEEEECCCCCCCCCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHH EALAHQALLIEEHYGRPMDIEWAKDGHTGQLFIVQARPETVRSNEQVMERYQLNNQSNVL HHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCCCEE VEGRAIGHRIGAGPVKVIHDISEMDRIQAGDVLVTDMTDPDWEPIMKKASAIVTNRGGRT EECHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC CHAAIIARELGIPAVVGCGNATELLKEGQNVTVSCAEGDTGYVYHELLDFSVQSSQVTEL HHHHHHHHHCCCCEEEECCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCC PDLPLKIMMNVGNPDRAFDFARLPNEGVGLARLEFIINRMIGVHPKALLEFDQQEPALQA CCCCEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHH EIKALMHGYDDPVEFYIGRLTEGIATLGAAFWPKPVIVRLSDFKSNEYANLVGGAGYEPH HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCC EENPMLGFRGAGRYVSDHFRDCFALECEAMKRVRNVMGLTNVEVMVPFVRTVAQAEAVVA CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ELARQGLKRGENGLKIIMMCEIPSNALLAEQFLEHFDGFSIGSNDMTQLTLGLDRDSGVV HHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHH SALFDERNEAVKALLSMAIQAAKRHGKYVGICGQGPSDHEDFALWLMEQGIDSLSLNPDT HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHH VVKTWLSLAQHTKH HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]