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The map label for this gene is yjbD [H]

Identifier: 153950092

GI number: 153950092

Start: 2052685

End: 2052948

Strand: Reverse

Name: yjbD [H]

Synonym: YpsIP31758_1776

Alternate gene names: 153950092

Gene position: 2052948-2052685 (Counterclockwise)

Preceding gene: 153946964

Following gene: 153947620

Centisome position: 43.46

GC content: 43.56

Gene sequence:

>264_bases
ATGAAAAAGCTAACATTAAAAGAGATGACCGAAAGTGAGCAACGCGACGTCAAAACGCAACTAGACAGAGCCAGAATTAA
CTTAGGGCGCGCGTTAACGAACTCAGAACAAAATAAAGTTAAAGATGAAGCTATCGAAAAAATCATGCACGCTCGGGAAC
AAATCGCCAAGTTAACCCGCGTAGAGAGAAAAACAAAAAAAACAGCACCAAGCACTACCACTTTTAGCTGGTCAGCATCC
ATCAGCACGCGTCCACCACGGTAA

Upstream 100 bases:

>100_bases
CTTTTATTGTCATTAATATCGTTTGGATCGCAATATCTTACATCCCCATACAAGATAAGGTTGTACACTGAGTAGGACTG
AGGCAAACAAGGCGAAAAAA

Downstream 100 bases:

>100_bases
TCACACAATTTACGTTACAGGCTAAAGTTAAATTACAGGTTTCTGGCAGATAATCACTGCCATCAAAGCAACATCAATAC
AATTATCAATACAACTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKKLTLKEMTESEQRDVKTQLDRARINLGRALTNSEQNKVKDEAIEKIMHAREQIAKLTRVERKTKKTAPSTTTFSWSAS
ISTRPPR

Sequences:

>Translated_87_residues
MKKLTLKEMTESEQRDVKTQLDRARINLGRALTNSEQNKVKDEAIEKIMHAREQIAKLTRVERKTKKTAPSTTTFSWSAS
ISTRPPR
>Mature_87_residues
MKKLTLKEMTESEQRDVKTQLDRARINLGRALTNSEQNKVKDEAIEKIMHAREQIAKLTRVERKTKKTAPSTTTFSWSAS
ISTRPPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790454, Length=88, Percent_Identity=51.1363636363636, Blast_Score=77, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020317
- ProDom:   PD063639 [H]

Pfam domain/function: PF11656 ComReg_Spx [H]

EC number: NA

Molecular weight: Translated: 10041; Mature: 10041

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTLKEMTESEQRDVKTQLDRARINLGRALTNSEQNKVKDEAIEKIMHAREQIAKLTR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VERKTKKTAPSTTTFSWSASISTRPPR
HHHHHHHCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKKLTLKEMTESEQRDVKTQLDRARINLGRALTNSEQNKVKDEAIEKIMHAREQIAKLTR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VERKTKKTAPSTTTFSWSASISTRPPR
HHHHHHHCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]