Click here to switch to the map view.

The map label for this gene is rcsD [H]

Identifier: 153950009

GI number: 153950009

Start: 3116269

End: 3118887

Strand: Direct

Name: rcsD [H]

Synonym: YpsIP31758_2763

Alternate gene names: 153950009

Gene position: 3116269-3118887 (Clockwise)

Preceding gene: 153949416

Following gene: 153948306

Centisome position: 65.98

GC content: 41.62

Gene sequence:

>2619_bases
ATGACTGTTGGGCTATATGCCTATAACTATACCAATGCTTATCTGACTGAAAAGAAGCATGCTTTAACGAATATCGCTAA
CGGTTTGCAACAACGCATTGATGACTATCGATATCATACTTACCAAATATATGATTTAGTCAATAATCCGATCAAAGCAA
GTGAGCCCCCTCCTGTGGTGCAGGAAACCCGCCTGCGCCCTGACGTTTACTATATTGAAAAGCCTCGCAGAAAGACTGAC
GCTATCATTTTTGGTAACCACGAGCCTGCAACGCTGACCATGGCATTACAGATATCTGACTATCTTGATAACCTGTGGGG
GCCGCAAAATGACACTTACTCGATGTACTATCTTAACGGGCAGGACAATAGCTTACTCCTGATTACGACTCAGGCACTAA
AAGAGGTCACATCACGCTTTAAAGAGAGCTACCTTACTGCCTTTGCTGAATCGCGACGGGCGGAAATGCTACAGCAGGTC
AATACGTTGGATGAGCGGGAGAGCTTCTCGCCCTTACGCAAATTGCGCTTCCAAAATGCCTACTATTTCACGCTAAGAAC
CACCTTTAACCGTCCTGGCCATTTAGCCACCGTGATCGCCTTTGATTTACCGATCAATGATTTAATTCCACCGAACATGG
CACGTTCGAACTTCCTGCTTCAACCAGATAAAGTGCCACTCAATGAGGGGGCTACCCCCGAAGATATTGCGGCAACCAGC
GTGTCACTGAACGGCTCATGGGTTGAGTTCTCCGCACCACTGGCAAATGTCACACTGAAAATTATTTATCGTGTACCGGT
TAGTCATTTGATTATCGACTTATTAATAAACAACTTTTGGTTAATCCTAGCCAATATTGTGTTATTAGCGCTAACCATTC
TGGCCGCCTATTTTGTCCGCCACCAATATGGTCGTCCAAGTGCTGATGTGACCGGACAATTAGAAGCTCAGAGATTGTTG
AGTCAGGAGATCATTACCAACCTACCGCAAGGCTTATTAATTTATGACTTCAGCAACAGCACTGTCATTGCCAGCAACAA
GATAGCGGAAAATCTACTGCCTCACCTGAATCTACAAAAAATTGCCACTATGGCAGAGCAGCACCACGGTGTGATTCAAG
GGACGGTTAATAACGAAGTTTATGAAATCCACATGTTCCGTAGCCAGATCTCACCAGAGACGTATCTTTTTCTACTTAAT
GATCAGGATAAAGAAGTCTTGGTGAATAAGAAATTGCAGCAAGCAAGGCGTGAGTACGATAAAAATCTACAAGCGCGGAA
ACTGATGTTGCACAACCTGGGGATTGAACTTGGCCAACCGGTCCACCACCTGAGTCAACTTGTTCGTACATTACAGGACA
CTACCGATTTGCAACAACAGCATGACATTAAGACCAAGCTGGTTGAGCAATCAGCAACTATCCTTGAACTGATTGATAAC
ATTACGTTACTGACTAAGCTGGAAACACAAGATTGGCAAACAGAACAACAGGTCTTCTCTTTATCAACCTTAATCGATAA
CCTGCTACTGGATCTGCTCCCCTCGATTAATCGGAAAGGCTTAAATCTGTTTAATCATTTTCATGTCAGCCTTGACCAAA
TTTATCTAGGTGATGAAAAGGTATTACGTAAAATACTTTCGTTGTTGCTGAATTATTCTATCGTTACCACAGCTTACGGA
AAAATTACCCTCAATGTAGATCATGAACCAGGACATCCGGAACAATTGGTTATTCAAATAATGGATACTGGCGCGGGTAT
TTCTGATGAAGAGATAGGTAATCTTAATTATCCTTTCCTTAGCCAAGCATTGGCCGACAGATACAATCATGGTTCAGGGC
TGACATTTTTTTTATGTAACCAATTATGTAAAAAATTAAACGGCCAATTAGAGATTCGCAGTAAAGTAGATATAGGTACA
CGCTATACTATCCGGTTAACAATAGCCGTTAAAAATGAACAACAAGACACGCAAGAAAAATTACTGGATGGTGTCACAGT
ACTATTAGATATAACCTCAGAAGAAGTACGCTCGATCATTACAATATTGTTAAATTCATTTGGTGCTAACTGCATTCTCA
CCGATGAACGCCTACCAGGGCGGGATTATGATGTTACAATAACGGATAATCCGCAACATTATGATAATTACACATTATTG
CTCGCGGCGGATGAAACGGGGTTTCACCAGTTACAAAACAATTATATACGGGCAAATTACAATTTAAGCAGCGCGGTTAT
TGATTCAATATTATTATTAATCGAGCGGCGAATTTTATCTGAACAATCGCAACAAAAGGTTGAGTACATTACAGAAGATG
ATATAAACCTCTATGAGAGGCAACTAAAAACCAGTGACTATTATTCCTTATTTGTCGAGACAGTACCGGTAGATCTGAAG
AAACTGTATACTGAACTTCAGCAAAGTGATTTAACATCACTTTCGCAAACCGTACATCGATTAAAAGGCGTATTTGCCAT
GCTGAACCTGGTTCTCGGCAAGCAGCTATGTGAAACATTAGAACAGCATATCGCAGATGGCGATCGGTTGAAGATCGAAA
ATAGCATCAGTCAGATTGATTTTTTCATCACCAGACTGTTGCAGGAAGGTAACCCATAA

Upstream 100 bases:

>100_bases
AACCAAGGGAATCGGCATTATCGTTATGCAAAACAATTCGTCTACCCACTCAGCGGCTAACATTACACGTTACTTCTGGC
TATTTATCGTACTTCTGCTC

Downstream 100 bases:

>100_bases
CCATGAACAACCTTAATGTAATTATTGCTGATGACCATCCAATTGTTTTGTTTGGCATCCGAAAGTCGCTTGAGCAAATT
GAATGGGTAAACGTTGTCGG

Product: phosphotransfer intermediate protein in two-component regulatory system with RcsBC

Products: NA

Alternate protein names: Phosphotransfer intermediate RcsD [H]

Number of amino acids: Translated: 872; Mature: 871

Protein sequence:

>872_residues
MTVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDDYRYHTYQIYDLVNNPIKASEPPPVVQETRLRPDVYYIEKPRRKTD
AIIFGNHEPATLTMALQISDYLDNLWGPQNDTYSMYYLNGQDNSLLLITTQALKEVTSRFKESYLTAFAESRRAEMLQQV
NTLDERESFSPLRKLRFQNAYYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMARSNFLLQPDKVPLNEGATPEDIAATS
VSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLLINNFWLILANIVLLALTILAAYFVRHQYGRPSADVTGQLEAQRLL
SQEIITNLPQGLLIYDFSNSTVIASNKIAENLLPHLNLQKIATMAEQHHGVIQGTVNNEVYEIHMFRSQISPETYLFLLN
DQDKEVLVNKKLQQARREYDKNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTTDLQQQHDIKTKLVEQSATILELIDN
ITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPSINRKGLNLFNHFHVSLDQIYLGDEKVLRKILSLLLNYSIVTTAYG
KITLNVDHEPGHPEQLVIQIMDTGAGISDEEIGNLNYPFLSQALADRYNHGSGLTFFLCNQLCKKLNGQLEIRSKVDIGT
RYTIRLTIAVKNEQQDTQEKLLDGVTVLLDITSEEVRSIITILLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLL
LAADETGFHQLQNNYIRANYNLSSAVIDSILLLIERRILSEQSQQKVEYITEDDINLYERQLKTSDYYSLFVETVPVDLK
KLYTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETLEQHIADGDRLKIENSISQIDFFITRLLQEGNP

Sequences:

>Translated_872_residues
MTVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDDYRYHTYQIYDLVNNPIKASEPPPVVQETRLRPDVYYIEKPRRKTD
AIIFGNHEPATLTMALQISDYLDNLWGPQNDTYSMYYLNGQDNSLLLITTQALKEVTSRFKESYLTAFAESRRAEMLQQV
NTLDERESFSPLRKLRFQNAYYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMARSNFLLQPDKVPLNEGATPEDIAATS
VSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLLINNFWLILANIVLLALTILAAYFVRHQYGRPSADVTGQLEAQRLL
SQEIITNLPQGLLIYDFSNSTVIASNKIAENLLPHLNLQKIATMAEQHHGVIQGTVNNEVYEIHMFRSQISPETYLFLLN
DQDKEVLVNKKLQQARREYDKNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTTDLQQQHDIKTKLVEQSATILELIDN
ITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPSINRKGLNLFNHFHVSLDQIYLGDEKVLRKILSLLLNYSIVTTAYG
KITLNVDHEPGHPEQLVIQIMDTGAGISDEEIGNLNYPFLSQALADRYNHGSGLTFFLCNQLCKKLNGQLEIRSKVDIGT
RYTIRLTIAVKNEQQDTQEKLLDGVTVLLDITSEEVRSIITILLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLL
LAADETGFHQLQNNYIRANYNLSSAVIDSILLLIERRILSEQSQQKVEYITEDDINLYERQLKTSDYYSLFVETVPVDLK
KLYTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETLEQHIADGDRLKIENSISQIDFFITRLLQEGNP
>Mature_871_residues
TVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDDYRYHTYQIYDLVNNPIKASEPPPVVQETRLRPDVYYIEKPRRKTDA
IIFGNHEPATLTMALQISDYLDNLWGPQNDTYSMYYLNGQDNSLLLITTQALKEVTSRFKESYLTAFAESRRAEMLQQVN
TLDERESFSPLRKLRFQNAYYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMARSNFLLQPDKVPLNEGATPEDIAATSV
SLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLLINNFWLILANIVLLALTILAAYFVRHQYGRPSADVTGQLEAQRLLS
QEIITNLPQGLLIYDFSNSTVIASNKIAENLLPHLNLQKIATMAEQHHGVIQGTVNNEVYEIHMFRSQISPETYLFLLND
QDKEVLVNKKLQQARREYDKNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTTDLQQQHDIKTKLVEQSATILELIDNI
TLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPSINRKGLNLFNHFHVSLDQIYLGDEKVLRKILSLLLNYSIVTTAYGK
ITLNVDHEPGHPEQLVIQIMDTGAGISDEEIGNLNYPFLSQALADRYNHGSGLTFFLCNQLCKKLNGQLEIRSKVDIGTR
YTIRLTIAVKNEQQDTQEKLLDGVTVLLDITSEEVRSIITILLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLLL
AADETGFHQLQNNYIRANYNLSSAVIDSILLLIERRILSEQSQQKVEYITEDDINLYERQLKTSDYYSLFVETVPVDLKK
LYTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETLEQHIADGDRLKIENSISQIDFFITRLLQEGNP

Specific function: May serves as a phosphotransfer intermediate between RcsC and RcsB. It may acquire a phosphoryl group at His-842 from RcsC 'Asp-866' and transmit it to 'Asp-56' of RcsB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HPt domain [H]

Homologues:

Organism=Escherichia coli, GI1788545, Length=877, Percent_Identity=45.9521094640821, Blast_Score=750, Evalue=0.0,
Organism=Escherichia coli, GI145693157, Length=465, Percent_Identity=24.7311827956989, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1788713, Length=246, Percent_Identity=24.7967479674797, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87081816, Length=470, Percent_Identity=21.2765957446809, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR008207
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c; PF01627 Hpt [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 99677; Mature: 99546

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50894 HPT ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDDYRYHTYQIYDLVNNPIKASEPPPVV
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCCCCCCH
QETRLRPDVYYIEKPRRKTDAIIFGNHEPATLTMALQISDYLDNLWGPQNDTYSMYYLNG
HHHCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEEEHHHHHHHCCCCCCCEEEEEEEC
QDNSLLLITTQALKEVTSRFKESYLTAFAESRRAEMLQQVNTLDERESFSPLRKLRFQNA
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
YYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMARSNFLLQPDKVPLNEGATPEDIAATS
EEEEEEEECCCCCCEEEEEEEECCHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHCEEE
VSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLLINNFWLILANIVLLALTILAAYFVR
EECCCCEEEECCCHHHHEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQYGRPSADVTGQLEAQRLLSQEIITNLPQGLLIYDFSNSTVIASNKIAENLLPHLNLQK
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHCCCCCHHH
IATMAEQHHGVIQGTVNNEVYEIHMFRSQISPETYLFLLNDQDKEVLVNKKLQQARREYD
HHHHHHHCCCEEEEECCCCEEEEEEHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
KNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTTDLQQQHDIKTKLVEQSATILELIDN
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPSINRKGLNLFNHFHVSLDQIYLGDEK
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEECCHH
VLRKILSLLLNYSIVTTAYGKITLNVDHEPGHPEQLVIQIMDTGAGISDEEIGNLNYPFL
HHHHHHHHHHCCHHEEEEEEEEEEEECCCCCCCHHHHEEEECCCCCCCCCCCCCCCCHHH
SQALADRYNHGSGLTFFLCNQLCKKLNGQLEIRSKVDIGTRYTIRLTIAVKNEQQDTQEK
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEECCCCHHHHHH
LLDGVTVLLDITSEEVRSIITILLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLL
HHCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEE
LAADETGFHQLQNNYIRANYNLSSAVIDSILLLIERRILSEQSQQKVEYITEDDINLYER
EEECCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QLKTSDYYSLFVETVPVDLKKLYTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETL
HHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQHIADGDRLKIENSISQIDFFITRLLQEGNP
HHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TVGLYAYNYTNAYLTEKKHALTNIANGLQQRIDDYRYHTYQIYDLVNNPIKASEPPPVV
EEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCCCCCCH
QETRLRPDVYYIEKPRRKTDAIIFGNHEPATLTMALQISDYLDNLWGPQNDTYSMYYLNG
HHHCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEEEHHHHHHHCCCCCCCEEEEEEEC
QDNSLLLITTQALKEVTSRFKESYLTAFAESRRAEMLQQVNTLDERESFSPLRKLRFQNA
CCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
YYFTLRTTFNRPGHLATVIAFDLPINDLIPPNMARSNFLLQPDKVPLNEGATPEDIAATS
EEEEEEEECCCCCCEEEEEEEECCHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHCEEE
VSLNGSWVEFSAPLANVTLKIIYRVPVSHLIIDLLINNFWLILANIVLLALTILAAYFVR
EECCCCEEEECCCHHHHEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HQYGRPSADVTGQLEAQRLLSQEIITNLPQGLLIYDFSNSTVIASNKIAENLLPHLNLQK
HHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHCCCCCHHH
IATMAEQHHGVIQGTVNNEVYEIHMFRSQISPETYLFLLNDQDKEVLVNKKLQQARREYD
HHHHHHHCCCEEEEECCCCEEEEEEHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
KNLQARKLMLHNLGIELGQPVHHLSQLVRTLQDTTDLQQQHDIKTKLVEQSATILELIDN
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ITLLTKLETQDWQTEQQVFSLSTLIDNLLLDLLPSINRKGLNLFNHFHVSLDQIYLGDEK
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEECCHH
VLRKILSLLLNYSIVTTAYGKITLNVDHEPGHPEQLVIQIMDTGAGISDEEIGNLNYPFL
HHHHHHHHHHCCHHEEEEEEEEEEEECCCCCCCHHHHEEEECCCCCCCCCCCCCCCCHHH
SQALADRYNHGSGLTFFLCNQLCKKLNGQLEIRSKVDIGTRYTIRLTIAVKNEQQDTQEK
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEECCCCHHHHHH
LLDGVTVLLDITSEEVRSIITILLNSFGANCILTDERLPGRDYDVTITDNPQHYDNYTLL
HHCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEE
LAADETGFHQLQNNYIRANYNLSSAVIDSILLLIERRILSEQSQQKVEYITEDDINLYER
EEECCCHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QLKTSDYYSLFVETVPVDLKKLYTELQQSDLTSLSQTVHRLKGVFAMLNLVLGKQLCETL
HHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQHIADGDRLKIENSISQIDFFITRLLQEGNP
HHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2404948; 7984428; 11758943; 11309126 [H]