| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950007
Identifier: 153950007
GI number: 153950007
Start: 2175849
End: 2177105
Strand: Reverse
Name: 153950007
Synonym: YpsIP31758_1877
Alternate gene names: NA
Gene position: 2177105-2175849 (Counterclockwise)
Preceding gene: 153949860
Following gene: 153948178
Centisome position: 46.09
GC content: 32.22
Gene sequence:
>1257_bases ATGTTAACAACAATGTTTTTCACCAACCCATTCCAAGTCAATAACGTGTCTTTAGAACGTAGTGAAGATAGTCATCAGCA CACAAAAGTGGAAATATATGATGAACTTTTGGGTAAGAATAACGTGACTATATGCACAACTGAAAATCTCGATAGAAAAT CACATGACTACTTTGATTCCAAAAAACATGAAATATCCTACAATGACAAAAAACATGGTGATATAAAACTGACAATTTCA GGTAGGGGTAGGCACGAAGACATTGTGATATTTAAATCAGGAACTAAACTAGATGTTCCAGAATATGTCGAAAGAAACAT TCTGTCTATGAATGGGACATTTTCTCATAATGAAATGCATGTATTAGAAGGTATTATTTCAAAAAAAAAGGGCAGGGGGA AAGAAGTGTTTCCCTATGTGGAACTAAATGAAAATGAAGTGAAACATGGAGCTTCGACGTCGAGCAAAGATTTTAAGAGT TTGATTGATTTTAGATTGAAGAGGAACCCACAAGTAAAAGAAATACTGATCCCTGTGTTATCGAATAAAGATCATTGGTA TGCAATACATATAGAGATAGATAAGGATAGTAATAATTTAACCCCTACAATAATAAACACCACAAATGAGGCAAAAGTAA AAGATAGTTATGATTGTATATTAAATGGCTATAAGAAAATTCAGTCATTATTGGGCGAAATGTTTAAGGAAAGTGAGATT TTTCATGACTTTAATATCGGTGACTTTAAATTTTGTCAATCATTACAATATGGTAATATGGGGTGCGGAATTACAACAAA TTTAAATGAACAAGCTATTTTAAATGGGAAAATGGAAATCGATGATTTGGCGTTTACCAAAGAATCATTTAGAACAAATG AACAAGTGTTGGAAATGTCAAATATTGATGTTTTTTCTGAAGGGAAAAAATATGTTTTTTTCGGTAAAAAAGCGGAATTG GCAAAAAGATTTACCGAATTGTTAGGGGATGACTGTATCCCCTCAATAATGCTAAAACAAGAACATTATGATGAAAATGA CTTCAATAATGACATTGGTGCTTTTTTCAACGGAGATTTAGAAATAAAACAAGTAGAGTTAAGTATTAACATTCCACCGT ATTTGATAGAAGACAAATCTCAAAGAAGTAATTTAGCCATTGAATCAATAAGAAGGGCTGACCTCGCCTTGAATTACTTG GAGAGAATGGAGAAGAAAAATGCTGTTCTTACGGAGATACTCCATTATAAGTTTTGA
Upstream 100 bases:
>100_bases AATACATGACGATTTTTGAGTGATGAAAGGATTGGCTACTTAAAATCAGCGTGGTTAGCTCGGAATATTAAATCATTAGC AATGAGATAAGGTATTATTT
Downstream 100 bases:
>100_bases GCCTGTCCATAATTCTGTGTAAACACCACTTGGGGTTCTACGCCGGAATCCCAGATTTTTCCGTCACCCCTGTTTCAACC TGGCAACCTTCGCTGGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MLTTMFFTNPFQVNNVSLERSEDSHQHTKVEIYDELLGKNNVTICTTENLDRKSHDYFDSKKHEISYNDKKHGDIKLTIS GRGRHEDIVIFKSGTKLDVPEYVERNILSMNGTFSHNEMHVLEGIISKKKGRGKEVFPYVELNENEVKHGASTSSKDFKS LIDFRLKRNPQVKEILIPVLSNKDHWYAIHIEIDKDSNNLTPTIINTTNEAKVKDSYDCILNGYKKIQSLLGEMFKESEI FHDFNIGDFKFCQSLQYGNMGCGITTNLNEQAILNGKMEIDDLAFTKESFRTNEQVLEMSNIDVFSEGKKYVFFGKKAEL AKRFTELLGDDCIPSIMLKQEHYDENDFNNDIGAFFNGDLEIKQVELSINIPPYLIEDKSQRSNLAIESIRRADLALNYL ERMEKKNAVLTEILHYKF
Sequences:
>Translated_418_residues MLTTMFFTNPFQVNNVSLERSEDSHQHTKVEIYDELLGKNNVTICTTENLDRKSHDYFDSKKHEISYNDKKHGDIKLTIS GRGRHEDIVIFKSGTKLDVPEYVERNILSMNGTFSHNEMHVLEGIISKKKGRGKEVFPYVELNENEVKHGASTSSKDFKS LIDFRLKRNPQVKEILIPVLSNKDHWYAIHIEIDKDSNNLTPTIINTTNEAKVKDSYDCILNGYKKIQSLLGEMFKESEI FHDFNIGDFKFCQSLQYGNMGCGITTNLNEQAILNGKMEIDDLAFTKESFRTNEQVLEMSNIDVFSEGKKYVFFGKKAEL AKRFTELLGDDCIPSIMLKQEHYDENDFNNDIGAFFNGDLEIKQVELSINIPPYLIEDKSQRSNLAIESIRRADLALNYL ERMEKKNAVLTEILHYKF >Mature_418_residues MLTTMFFTNPFQVNNVSLERSEDSHQHTKVEIYDELLGKNNVTICTTENLDRKSHDYFDSKKHEISYNDKKHGDIKLTIS GRGRHEDIVIFKSGTKLDVPEYVERNILSMNGTFSHNEMHVLEGIISKKKGRGKEVFPYVELNENEVKHGASTSSKDFKS LIDFRLKRNPQVKEILIPVLSNKDHWYAIHIEIDKDSNNLTPTIINTTNEAKVKDSYDCILNGYKKIQSLLGEMFKESEI FHDFNIGDFKFCQSLQYGNMGCGITTNLNEQAILNGKMEIDDLAFTKESFRTNEQVLEMSNIDVFSEGKKYVFFGKKAEL AKRFTELLGDDCIPSIMLKQEHYDENDFNNDIGAFFNGDLEIKQVELSINIPPYLIEDKSQRSNLAIESIRRADLALNYL ERMEKKNAVLTEILHYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48277; Mature: 48277
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTTMFFTNPFQVNNVSLERSEDSHQHTKVEIYDELLGKNNVTICTTENLDRKSHDYFDS CEEEEEECCCEEECCEEEECCCCCCCCCCEEEHHHHHCCCCEEEEECCCCCCCCCCCCCC KKHEISYNDKKHGDIKLTISGRGRHEDIVIFKSGTKLDVPEYVERNILSMNGTFSHNEMH CCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHEECCCCCCCCHHH VLEGIISKKKGRGKEVFPYVELNENEVKHGASTSSKDFKSLIDFRLKRNPQVKEILIPVL HHHHHHHHCCCCCCEECEEEECCCCHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH SNKDHWYAIHIEIDKDSNNLTPTIINTTNEAKVKDSYDCILNGYKKIQSLLGEMFKESEI CCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH FHDFNIGDFKFCQSLQYGNMGCGITTNLNEQAILNGKMEIDDLAFTKESFRTNEQVLEMS HCCCCCCHHHHHHHCCCCCCCCCEECCCCCCEEECCCCEEHHHHHHHHHHCCCHHHHHHC NIDVFSEGKKYVFFGKKAELAKRFTELLGDDCIPSIMLKQEHYDENDFNNDIGAFFNGDL CCCEECCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCE EIKQVELSINIPPYLIEDKSQRSNLAIESIRRADLALNYLERMEKKNAVLTEILHYKF EEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTTMFFTNPFQVNNVSLERSEDSHQHTKVEIYDELLGKNNVTICTTENLDRKSHDYFDS CEEEEEECCCEEECCEEEECCCCCCCCCCEEEHHHHHCCCCEEEEECCCCCCCCCCCCCC KKHEISYNDKKHGDIKLTISGRGRHEDIVIFKSGTKLDVPEYVERNILSMNGTFSHNEMH CCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHEECCCCCCCCHHH VLEGIISKKKGRGKEVFPYVELNENEVKHGASTSSKDFKSLIDFRLKRNPQVKEILIPVL HHHHHHHHCCCCCCEECEEEECCCCHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH SNKDHWYAIHIEIDKDSNNLTPTIINTTNEAKVKDSYDCILNGYKKIQSLLGEMFKESEI CCCCCEEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH FHDFNIGDFKFCQSLQYGNMGCGITTNLNEQAILNGKMEIDDLAFTKESFRTNEQVLEMS HCCCCCCHHHHHHHCCCCCCCCCEECCCCCCEEECCCCEEHHHHHHHHHHCCCHHHHHHC NIDVFSEGKKYVFFGKKAELAKRFTELLGDDCIPSIMLKQEHYDENDFNNDIGAFFNGDL CCCEECCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCEECCCE EIKQVELSINIPPYLIEDKSQRSNLAIESIRRADLALNYLERMEKKNAVLTEILHYKF EEEEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA