| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949969
Identifier: 153949969
GI number: 153949969
Start: 4159911
End: 4160558
Strand: Direct
Name: 153949969
Synonym: YpsIP31758_3688
Alternate gene names: NA
Gene position: 4159911-4160558 (Clockwise)
Preceding gene: 153948866
Following gene: 153950619
Centisome position: 88.07
GC content: 47.84
Gene sequence:
>648_bases GTGAGAACAGATAAGGCTGTCGTGGTCTTCATCGTTGCTGGATGGGCAACCTTTTGTGCCCTTATCGCCACCGCCGTAAC ATCATTTCCTATCGCATTAGAGAATTTATTTATTCAGCCCTCCCTATTCCTTTCTCCGTTACTGCTAAAGCCCTTGTCCT GTCTGATATGGCGATTCAGAAAGCCGGTATTTGTACTAAAGAAAAAATCAGGTTGTATTTGGCTGCACCTAAATCCTTGG GTCAGCACCGGCCAGCTCGGTGTCAGGGAGATCACTGAGTTTTGGTTCTCACTCATCGCCACACTCAAATCTTCTTTGGC GCAGTCACCTCAGCCCATCATCATGTCTTCTCACCTTTTGAGTTCAAAGCGTATTGCCAGACTGCGGCGACAATTCCCTG CCGAATACTATCGGTTTCATTCCATCAATAGGAGCGTCGGACACACAGAGCACATCGGTTTACAGTTAGAGATTTTAATC AAAGAATGGCGGTGGTTTACCCCCTCCACGCAGGGTGGCATTGTGGTGATACGCAGACGACAACTCGATGTATTTGAAGA GGAAACTCGCCCTGAACAGGGGAGTTCCCCCATTCAGGATGATTTGTTAAGAACGGGAGGCTATCCCATTGAGGTGATAT TCCCTTAG
Upstream 100 bases:
>100_bases AAACCCTTGACCTATTTTTCAGCCACAGATGAAGAGTTTCTTCAGGCGCTTAAAGTGCCGTTATGTATAAATGGCGTTTT TGTCCTAAGGAATCGCAAGT
Downstream 100 bases:
>100_bases GTGTGGCGTTAATTTATACCGCGGGTTCTTCCTGTCCATTAACCGTGACTTCTTCAACTTTCAGTGGAGGTAAAAATGGC CCGGCACCGTACTCTCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRTDKAVVVFIVAGWATFCALIATAVTSFPIALENLFIQPSLFLSPLLLKPLSCLIWRFRKPVFVLKKKSGCIWLHLNPW VSTGQLGVREITEFWFSLIATLKSSLAQSPQPIIMSSHLLSSKRIARLRRQFPAEYYRFHSINRSVGHTEHIGLQLEILI KEWRWFTPSTQGGIVVIRRRQLDVFEEETRPEQGSSPIQDDLLRTGGYPIEVIFP
Sequences:
>Translated_215_residues MRTDKAVVVFIVAGWATFCALIATAVTSFPIALENLFIQPSLFLSPLLLKPLSCLIWRFRKPVFVLKKKSGCIWLHLNPW VSTGQLGVREITEFWFSLIATLKSSLAQSPQPIIMSSHLLSSKRIARLRRQFPAEYYRFHSINRSVGHTEHIGLQLEILI KEWRWFTPSTQGGIVVIRRRQLDVFEEETRPEQGSSPIQDDLLRTGGYPIEVIFP >Mature_215_residues MRTDKAVVVFIVAGWATFCALIATAVTSFPIALENLFIQPSLFLSPLLLKPLSCLIWRFRKPVFVLKKKSGCIWLHLNPW VSTGQLGVREITEFWFSLIATLKSSLAQSPQPIIMSSHLLSSKRIARLRRQFPAEYYRFHSINRSVGHTEHIGLQLEILI KEWRWFTPSTQGGIVVIRRRQLDVFEEETRPEQGSSPIQDDLLRTGGYPIEVIFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24645; Mature: 24645
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDKAVVVFIVAGWATFCALIATAVTSFPIALENLFIQPSLFLSPLLLKPLSCLIWRFR CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC KPVFVLKKKSGCIWLHLNPWVSTGQLGVREITEFWFSLIATLKSSLAQSPQPIIMSSHLL CCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH SSKRIARLRRQFPAEYYRFHSINRSVGHTEHIGLQLEILIKEWRWFTPSTQGGIVVIRRR HHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHCCEEEEEEEEHHCCCCCCCCCCEEEEEEC QLDVFEEETRPEQGSSPIQDDLLRTGGYPIEVIFP CCCHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECC >Mature Secondary Structure MRTDKAVVVFIVAGWATFCALIATAVTSFPIALENLFIQPSLFLSPLLLKPLSCLIWRFR CCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC KPVFVLKKKSGCIWLHLNPWVSTGQLGVREITEFWFSLIATLKSSLAQSPQPIIMSSHLL CCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH SSKRIARLRRQFPAEYYRFHSINRSVGHTEHIGLQLEILIKEWRWFTPSTQGGIVVIRRR HHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHCCEEEEEEEEHHCCCCCCCCCCEEEEEEC QLDVFEEETRPEQGSSPIQDDLLRTGGYPIEVIFP CCCHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA