| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949965
Identifier: 153949965
GI number: 153949965
Start: 3990363
End: 3991409
Strand: Direct
Name: 153949965
Synonym: YpsIP31758_3535
Alternate gene names: NA
Gene position: 3990363-3991409 (Clockwise)
Preceding gene: 153950427
Following gene: 153948702
Centisome position: 84.48
GC content: 52.24
Gene sequence:
>1047_bases GTGATCGTTGAAGGATATTATCAGTACCCAGGTCGGGCCGCCCGCGAGGCGGCCCGACTACTGCTGAATGAAATAGGCGA TAACGTGACGTTGCTACGTGATGGAGAACAGCACTATTTCTCCCTGTCGCAGCTCAACGTTTCGTCTTCATTAGGTTCTA TCCCACTGAACCTGACATTTCCCGATGGCGGTCGCTTTGTTCCCTCCGATGACGCTTTGTTCCGTAAGTGGCTATACCAA CAGCGCTCACCTGGGGTAGTGCATCGCTTAGAGCGTCATAAAAGCGGTGTCTTGTTGACGTTGCTCATCACCCCATTACT TATCTTGGCTTACATCTATTGGCTACTTCCTTGGGCCAGCAGTGAAATTGCGCTGCGTATCCCAACCACTGCTGAACAGA AACTGGGGGAGCACTCCCTTGAATGGCTACAGCAAAGTGGATTTAAACCTTCAGCGTTGCCCGCAGAACGACAAGAAGCG ATCCAACAACTCTTTTTGCAGGTAATGCCCCCGCAAATGCGGCAGGAACGCACACCGCTCAAACTGGTATTGATGACCGC GCCGACGACAGCCAATGCCTTTATGTTACCTGATGGCACAATGGTGATCAGCGACGATTTGATCAAGCTGACGACCAGTG ATGATGCCCTGGCTGCAGTGATGTTGCATGAGATGGGGCATCATGCCCACCGCCACTCGATGCAGATGGTGGTACGTTCA TCATTAGTCGCCTTGACCTTTATGTGGATGACCGGGGACGTCAATGGCATTGGCGATACGCTGTTGCAATCGGCCGCCTT TATTCATGAGATGCAGTTTTCCCGCACAATAGAGAGCGAGGCAGATTCTTGGGCGATAGCCGAAATGCAGCGCGAAAAGC GTTCGTTGTTAGCCATGGAAGATATTTACCATGCGTTGCAACAAACCACCACGCCAGAGGAGGCCGAAACTCGGGCTGGT ATACCCGAGTGGCTGAGTTCCCATCCTGATATGCCAGCCAGGTTAGACGTCATACGCGCTGCAAGAGAGAAGATGGCGCA GGAATAA
Upstream 100 bases:
>100_bases CATCAGGACACAGCGAATAGCGCCCTCGCCGAAGAAGCAGTACAAGCACTCGATCTGGGCACTGGCTTTTGAGTAACTAT CAGTGGTTGAGTAGCTATCA
Downstream 100 bases:
>100_bases AGATTACCGATCGCACAGTTCACTTAAAACACCTGCATCGTTTTATTGCTGTAAGTTTATTGATGGTGAAGGCCTCAGTT TCCAATTCTGCAAGATCTTC
Product: M48 family peptidase
Products: NA
Alternate protein names: Zn-Dependent Protease With Chaperone Function; Zinc Metalloprotease With Chaperone Function; M48 Family Peptidase; Metalloprotease Protein; Metalloendopeptidase; Zinc Metalloendopeptidase; M48 Peptidase Family Protein; Zn-Dependent Protease
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MIVEGYYQYPGRAAREAARLLLNEIGDNVTLLRDGEQHYFSLSQLNVSSSLGSIPLNLTFPDGGRFVPSDDALFRKWLYQ QRSPGVVHRLERHKSGVLLTLLITPLLILAYIYWLLPWASSEIALRIPTTAEQKLGEHSLEWLQQSGFKPSALPAERQEA IQQLFLQVMPPQMRQERTPLKLVLMTAPTTANAFMLPDGTMVISDDLIKLTTSDDALAAVMLHEMGHHAHRHSMQMVVRS SLVALTFMWMTGDVNGIGDTLLQSAAFIHEMQFSRTIESEADSWAIAEMQREKRSLLAMEDIYHALQQTTTPEEAETRAG IPEWLSSHPDMPARLDVIRAAREKMAQE
Sequences:
>Translated_348_residues MIVEGYYQYPGRAAREAARLLLNEIGDNVTLLRDGEQHYFSLSQLNVSSSLGSIPLNLTFPDGGRFVPSDDALFRKWLYQ QRSPGVVHRLERHKSGVLLTLLITPLLILAYIYWLLPWASSEIALRIPTTAEQKLGEHSLEWLQQSGFKPSALPAERQEA IQQLFLQVMPPQMRQERTPLKLVLMTAPTTANAFMLPDGTMVISDDLIKLTTSDDALAAVMLHEMGHHAHRHSMQMVVRS SLVALTFMWMTGDVNGIGDTLLQSAAFIHEMQFSRTIESEADSWAIAEMQREKRSLLAMEDIYHALQQTTTPEEAETRAG IPEWLSSHPDMPARLDVIRAAREKMAQE >Mature_348_residues MIVEGYYQYPGRAAREAARLLLNEIGDNVTLLRDGEQHYFSLSQLNVSSSLGSIPLNLTFPDGGRFVPSDDALFRKWLYQ QRSPGVVHRLERHKSGVLLTLLITPLLILAYIYWLLPWASSEIALRIPTTAEQKLGEHSLEWLQQSGFKPSALPAERQEA IQQLFLQVMPPQMRQERTPLKLVLMTAPTTANAFMLPDGTMVISDDLIKLTTSDDALAAVMLHEMGHHAHRHSMQMVVRS SLVALTFMWMTGDVNGIGDTLLQSAAFIHEMQFSRTIESEADSWAIAEMQREKRSLLAMEDIYHALQQTTTPEEAETRAG IPEWLSSHPDMPARLDVIRAAREKMAQE
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39258; Mature: 39258
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVEGYYQYPGRAAREAARLLLNEIGDNVTLLRDGEQHYFSLSQLNVSSSLGSIPLNLTF CEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHEEHHHHEHHHCCCCCEEEEEC PDGGRFVPSDDALFRKWLYQQRSPGVVHRLERHKSGVLLTLLITPLLILAYIYWLLPWAS CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCC SEIALRIPTTAEQKLGEHSLEWLQQSGFKPSALPAERQEAIQQLFLQVMPPQMRQERTPL CCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCE KLVLMTAPTTANAFMLPDGTMVISDDLIKLTTSDDALAAVMLHEMGHHAHRHSMQMVVRS EEEEEECCCCCCEEECCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLVALTFMWMTGDVNGIGDTLLQSAAFIHEMQFSRTIESEADSWAIAEMQREKRSLLAME HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH DIYHALQQTTTPEEAETRAGIPEWLSSHPDMPARLDVIRAAREKMAQE HHHHHHHHCCCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVEGYYQYPGRAAREAARLLLNEIGDNVTLLRDGEQHYFSLSQLNVSSSLGSIPLNLTF CEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHEEHHHHEHHHCCCCCEEEEEC PDGGRFVPSDDALFRKWLYQQRSPGVVHRLERHKSGVLLTLLITPLLILAYIYWLLPWAS CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCC SEIALRIPTTAEQKLGEHSLEWLQQSGFKPSALPAERQEAIQQLFLQVMPPQMRQERTPL CCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCE KLVLMTAPTTANAFMLPDGTMVISDDLIKLTTSDDALAAVMLHEMGHHAHRHSMQMVVRS EEEEEECCCCCCEEECCCCCEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLVALTFMWMTGDVNGIGDTLLQSAAFIHEMQFSRTIESEADSWAIAEMQREKRSLLAME HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH DIYHALQQTTTPEEAETRAGIPEWLSSHPDMPARLDVIRAAREKMAQE HHHHHHHHCCCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA