| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949936
Identifier: 153949936
GI number: 153949936
Start: 3508620
End: 3509942
Strand: Reverse
Name: 153949936
Synonym: YpsIP31758_3119
Alternate gene names: NA
Gene position: 3509942-3508620 (Counterclockwise)
Preceding gene: 153948560
Following gene: 153949448
Centisome position: 74.31
GC content: 36.36
Gene sequence:
>1323_bases ATGACTGTTAGTTATGTCGGGCGAGGAGAGTCACTTTCATGGGTATATGGAGTAGACAATGTGAATATACCAAATTCAGA TGTGGTCGATTCACCTTTTAATGACTTCACTCAATTTGATAATATGGATTTTTCGGCTAATTATAATTCTATTTTATCGA GAGAAAATAAATCGCTAATTACGTCATTTATAAGTGAATATAATGATAAGGTTAAGAGGTTAAGTGAAGATGAAAATTAT ATTTTAACTCAAAAATATATTTCATCACTGGATGAAATGTGTGAGGAAATAAATAAAAAATTACTTTATTGTCATGATAG TAAAGTATTAAAAAATGTTTTAGATTCGACGCTTCAAAAGCAAACTGAAATGAGTAAATACATAGTGTTACTGGAAGGTG TGCCTTATCGCATTGAACCAAGAGATATCGCAGCTGACATTACGAATGAACGAATAAATGGTGCTATAGAGTTATTGAAT TTTGTTGCCAAGGCTTACCCGAAAATAGCGAAGGAATCCGCTAAGTTGCAGCGATCCCGACCCCATGCCAATTGCAGTGT TGAGACGTTGAATGACTATTTAGAACAGTTAAAAAAAATATTGTCAGGCAAGAAACTACTCAGTAATAGAAGACAACGCT CTTCATCAATTCATTTTAAAGACGCATGGGGTGGCGGTGATAAGTCTGGACGAATAAATGCGCAAAAAAACGTAGAGATT AATAAGAAAATGGAAGGTATCTATATTGGATTCACTCAGCGAACGATAGAGAGTCAGACTGAAAATCAGTCTGTGGTTTT TAAATCATCAAAACATGAGATGGTAGAAAATAAATTAATCTATTTAGCCTCTTTAGCTAATGAGTTGAGTAAGCTAAATG ACTCTATTAGTGATGAGAATTTAAAATATTCTATAAATAAAGTGGTTGGTGAAGTCCTTGAGTTGAAATTGAAGAAAATT CAGAAAATGGCGAAAAGTTCGAAATGTAATTTTTCATTTTCTAATCTTAAGAAGGATTTAGCTATGCTGAGTTCGCTTGC GGTAACTGGCATCGCCGCAGGTGTGATACCTACATTTATCGCCACCGGTATAGTGGCTGCAATAGCGCCTATCTTAGCGG CGTTAGGGTGTGCAATATATGCATTTAATCCACAGCTAAAAGAAACAGAAACCAGTAAATTACTGGATGCGAGCATCAAA GATATCGGGGCGACGTTGGGGAGTGAGCTAAAGGATGAGAAGTTGGGGCGCTTCGAATATCTGCGCCATAAATATGCCGC TTATAAGTACCGTAAGGCTGCCAAGCACACATTCGATGGCTGA
Upstream 100 bases:
>100_bases GTTACTGATAAGTTTATTATTTTTCTGATAGTTAATAAATTCGTGATCAGTCACCTTTAAAAGGTAAATAAAATACAGGC TGATATTAAAAGGAATATTT
Downstream 100 bases:
>100_bases TCGGCCTTTGTTGTCATCGCACTTCGCGGTAAACTGTCGGTAAGTTTAGGTTCACCAATCAGGAAGCGTTATGCATTGTC CGTTTTGTGCCGCTGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSEDENY ILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLN FVAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKI QKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIK DIGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG
Sequences:
>Translated_440_residues MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSEDENY ILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLN FVAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKI QKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIK DIGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG >Mature_439_residues TVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSEDENYI LTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNF VAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEIN KKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKIQ KMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKD IGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49424; Mature: 49293
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLI CEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCHHHHH TSFISEYNDKVKRLSEDENYILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQK HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH QTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVAKAYPKIAKESAKLQRSR HHHHHHEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEE NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDEN CCCCCEEEEEEHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LKYSINKVVGEVLELKLKKIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKDIGATLGSELKDEKLGRFEY HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRHKYAAYKYRKAAKHTFDG HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLI EEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCHHHHH TSFISEYNDKVKRLSEDENYILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQK HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH QTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVAKAYPKIAKESAKLQRSR HHHHHHEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEE NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDEN CCCCCEEEEEEHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LKYSINKVVGEVLELKLKKIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKDIGATLGSELKDEKLGRFEY HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRHKYAAYKYRKAAKHTFDG HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA