| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153949884
Identifier: 153949884
GI number: 153949884
Start: 1852979
End: 1853392
Strand: Direct
Name: 153949884
Synonym: YpsIP31758_1596
Alternate gene names: NA
Gene position: 1852979-1853392 (Clockwise)
Preceding gene: 153950473
Following gene: 153947095
Centisome position: 39.23
GC content: 32.37
Gene sequence:
>414_bases ATGAAAAAAGTAGCTATAATTTTTATCGTGTTAATATTAATTGTGGCATTGCCAATGATATATTTTTGGCCGACGATAAA AGTATTAACGGGAGGGAATTCACGTTATACCGAACAGGATAAAAAAAACTATCAATTACTCACAGATGAGATAATAAAGA ATTGTCCTCGTATATCATCGAATTATGAATTTGGTTATGCAACGGTGGATGGGCCTGGTATAGAGGTTAGTGCAGTTACA TTTCATGGTTCTAATGATATTGAAAAAATTCATAATTACTTATATTCAATAGGTTTTACATTAGATCGTACTGAGGATAG TGGTGAATATTGGAAATCTGAACGTTCAGATAAAACAGTACATATCGGGGTTATAAATAGTCCCAAGACGACCATAGTTG AAGTAATGAAATAG
Upstream 100 bases:
>100_bases CAAACAGTAATACCTTACAATAATTTCAAATCGGGAAATGTGGGGATTGCCTCACAAGATGGTGTTGAAGTTGATACCCA TTTCTTAGGATAGTCGTACA
Downstream 100 bases:
>100_bases AAGCATTTATTCGGCCCTGTCACTAAAAATACGACATCAATAAACACTCGCGGTCAGATTCCTCCTAAACACACTCACTT ACACCTGCTCTTGGGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKNYQLLTDEIIKNCPRISSNYEFGYATVDGPGIEVSAVT FHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTVHIGVINSPKTTIVEVMK
Sequences:
>Translated_137_residues MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKNYQLLTDEIIKNCPRISSNYEFGYATVDGPGIEVSAVT FHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTVHIGVINSPKTTIVEVMK >Mature_137_residues MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKNYQLLTDEIIKNCPRISSNYEFGYATVDGPGIEVSAVT FHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTVHIGVINSPKTTIVEVMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15583; Mature: 15583
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKNYQLLTDEIIKNCPRISS CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC NYEFGYATVDGPGIEVSAVTFHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTV CCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEECCCCCCHHHHCCCCCCEE HIGVINSPKTTIVEVMK EEEEECCCCHHHHEECC >Mature Secondary Structure MKKVAIIFIVLILIVALPMIYFWPTIKVLTGGNSRYTEQDKKNYQLLTDEIIKNCPRISS CCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC NYEFGYATVDGPGIEVSAVTFHGSNDIEKIHNYLYSIGFTLDRTEDSGEYWKSERSDKTV CCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHCCEEECCCCCCHHHHCCCCCCEE HIGVINSPKTTIVEVMK EEEEECCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA