| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is yheV [H]
Identifier: 153949879
GI number: 153949879
Start: 4405936
End: 4406157
Strand: Reverse
Name: yheV [H]
Synonym: YpsIP31758_3929
Alternate gene names: 153949879
Gene position: 4406157-4405936 (Counterclockwise)
Preceding gene: 153950176
Following gene: 153949243
Centisome position: 93.29
GC content: 45.5
Gene sequence:
>222_bases ATGACTATCACTCTTAATAAGACAGTGACACGTAAAAGATTTATTGCCGGAGCCGTCTGCCCGCAATGTAATGCCTTGGA TACGCTGGCTTTATGGCGTGAGGATCAGGTTGAAGTAGTGGAGTGTGTTAAGTGTGGTCACCATCAACGCCAGACAGATG AACAGGTCAATAAACATGTTCGTCCACATGAGCAAGTGATCGGTATTTTTCCTCCAGAGTAG
Upstream 100 bases:
>100_bases AGCTCGCCGTGAGTTGGAAGATATTTTTCAACGAGAAATGCTACATGAAAGCCGGCAGTTAGATGGGTGGGATGAATACG AATAATGTCGAGGACAAACG
Downstream 100 bases:
>100_bases CGTTATCTGCCGTGATTTTTTATGCGGGTGAGTACAGCGGGGCAGATTTCCGCTACAATCTGTGCCAATTTTTGTTCCAA GGGTAGGAGATATCATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MTITLNKTVTRKRFIAGAVCPQCNALDTLALWREDQVEVVECVKCGHHQRQTDEQVNKHVRPHEQVIGIFPPE
Sequences:
>Translated_73_residues MTITLNKTVTRKRFIAGAVCPQCNALDTLALWREDQVEVVECVKCGHHQRQTDEQVNKHVRPHEQVIGIFPPE >Mature_72_residues TITLNKTVTRKRFIAGAVCPQCNALDTLALWREDQVEVVECVKCGHHQRQTDEQVNKHVRPHEQVIGIFPPE
Specific function: Unknown
COG id: COG3529
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082247, Length=66, Percent_Identity=57.5757575757576, Blast_Score=92, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012658 [H]
Pfam domain/function: PF09526 DUF2387 [H]
EC number: NA
Molecular weight: Translated: 8364; Mature: 8233
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITLNKTVTRKRFIAGAVCPQCNALDTLALWREDQVEVVECVKCGHHQRQTDEQVNKHV CEEECCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHCC RPHEQVIGIFPPE CCCHHEEECCCCC >Mature Secondary Structure TITLNKTVTRKRFIAGAVCPQCNALDTLALWREDQVEVVECVKCGHHQRQTDEQVNKHV EEECCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHCC RPHEQVIGIFPPE CCCHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]