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The map label for this gene is tatB

Identifier: 153949849

GI number: 153949849

Start: 308081

End: 308743

Strand: Direct

Name: tatB

Synonym: YpsIP31758_0275

Alternate gene names: 153949849

Gene position: 308081-308743 (Clockwise)

Preceding gene: 153950301

Following gene: 153948556

Centisome position: 6.52

GC content: 50.53

Gene sequence:

>663_bases
GTGTTCGATATCGGGTTTAGTGAACTGCTACTGGTCCTTGTAATTGGTCTGGTCGTACTTGGGCCGGAGCGATTACCTGT
CGCCGTAAGGACTGTTTCTGGCTGGATTCGTACATTGCGTTCGCTTGCGGCCACTGTACAAAACGAACTGGCACAAGAGC
TAAAACTACAAGAGTTACAAGACAGCCTGAAAAAAGTAGAGCAGGCCGGCTTACAAAATCTGACGCCTGAATTGAAGGCG
TCGATGGATGAACTCAAAGAGGCCGCAGAGGCGCTAAAACGTTCTTATCATGTTGATGCTGGATCAGAAGCTCCACATAC
GATCCATAACCCATTGGTGACAGAGCCGGAAGCGATCCACGACGGTGTTACGCCAGCGGAGCCAGCAACACAGGTTTCCG
CATTGGCACAGGCCCCTAATATACTTGAGGCAGGGACAGCGTCAGTGGTTGACTCTGTAGTCGAAGCTGCACCTGTTACT
ACCGTGAAATCGGTGGTTCAGGGGGAGGTATTGGTTAAGTCGACTCCAGTACAAGAAGTAGGGTTGGCAGATGTTATGGA
TAAACCCGTAACCAAGCAGCAAATCGATACAATCGATTCCCATGGCACGGATTTATCCAGTGCTGGCCCATCTCGTATTC
ACCAACCTGGCGGCGATCAGTAA

Upstream 100 bases:

>100_bases
CAGCAATGATGCTGACTTTGCGAAATCGATTACAGAAAAGCAGCAGCCCGTAGCAAAAGCTGAAGAATCTAAGAGTCACG
AAAAAGAACAGGGATAAGCT

Downstream 100 bases:

>100_bases
ACATGGCTGTTGATGATACCCAACCCCTTATCTCTCATCTGATAGAACTGCGTAAGCGGTTACTGAATTGTATAATCACC
ATTTTGGTGGTTTTTCTGGT

Product: twin arginine-targeting protein translocase TatB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MFDIGFSELLLVLVIGLVVLGPERLPVAVRTVSGWIRTLRSLAATVQNELAQELKLQELQDSLKKVEQAGLQNLTPELKA
SMDELKEAAEALKRSYHVDAGSEAPHTIHNPLVTEPEAIHDGVTPAEPATQVSALAQAPNILEAGTASVVDSVVEAAPVT
TVKSVVQGEVLVKSTPVQEVGLADVMDKPVTKQQIDTIDSHGTDLSSAGPSRIHQPGGDQ

Sequences:

>Translated_220_residues
MFDIGFSELLLVLVIGLVVLGPERLPVAVRTVSGWIRTLRSLAATVQNELAQELKLQELQDSLKKVEQAGLQNLTPELKA
SMDELKEAAEALKRSYHVDAGSEAPHTIHNPLVTEPEAIHDGVTPAEPATQVSALAQAPNILEAGTASVVDSVVEAAPVT
TVKSVVQGEVLVKSTPVQEVGLADVMDKPVTKQQIDTIDSHGTDLSSAGPSRIHQPGGDQ
>Mature_220_residues
MFDIGFSELLLVLVIGLVVLGPERLPVAVRTVSGWIRTLRSLAATVQNELAQELKLQELQDSLKKVEQAGLQNLTPELKA
SMDELKEAAEALKRSYHVDAGSEAPHTIHNPLVTEPEAIHDGVTPAEPATQVSALAQAPNILEAGTASVVDSVVEAAPVT
TVKSVVQGEVLVKSTPVQEVGLADVMDKPVTKQQIDTIDSHGTDLSSAGPSRIHQPGGDQ

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatB family

Homologues:

Organism=Escherichia coli, GI48994984, Length=167, Percent_Identity=64.6706586826347, Blast_Score=205, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TATB_YERPA (Q1CBF6)

Other databases:

- EMBL:   CP000308
- RefSeq:   YP_650161.1
- ProteinModelPortal:   Q1CBF6
- STRING:   Q1CBF6
- GeneID:   4122098
- GenomeReviews:   CP000308_GR
- KEGG:   ypa:YPA_0247
- eggNOG:   COG1826
- HOGENOM:   HBG751935
- OMA:   SMKRSYS
- ProtClustDB:   CLSK889563
- BioCyc:   YPES360102:YPA_0247-MONOMER
- HAMAP:   MF_00237
- InterPro:   IPR018448
- InterPro:   IPR003998
- PRINTS:   PR01506
- TIGRFAMs:   TIGR01410

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23280; Mature: 23280

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1d9d84ac)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDIGFSELLLVLVIGLVVLGPERLPVAVRTVSGWIRTLRSLAATVQNELAQELKLQELQ
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLKKVEQAGLQNLTPELKASMDELKEAAEALKRSYHVDAGSEAPHTIHNPLVTEPEAIH
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHH
DGVTPAEPATQVSALAQAPNILEAGTASVVDSVVEAAPVTTVKSVVQGEVLVKSTPVQEV
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCHHHH
GLADVMDKPVTKQQIDTIDSHGTDLSSAGPSRIHQPGGDQ
HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCH
>Mature Secondary Structure
MFDIGFSELLLVLVIGLVVLGPERLPVAVRTVSGWIRTLRSLAATVQNELAQELKLQELQ
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DSLKKVEQAGLQNLTPELKASMDELKEAAEALKRSYHVDAGSEAPHTIHNPLVTEPEAIH
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHH
DGVTPAEPATQVSALAQAPNILEAGTASVVDSVVEAAPVTTVKSVVQGEVLVKSTPVQEV
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCCCHHHH
GLADVMDKPVTKQQIDTIDSHGTDLSSAGPSRIHQPGGDQ
HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA