| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949848
Identifier: 153949848
GI number: 153949848
Start: 949837
End: 950253
Strand: Direct
Name: 153949848
Synonym: YpsIP31758_0789
Alternate gene names: NA
Gene position: 949837-950253 (Clockwise)
Preceding gene: 153950285
Following gene: 153949290
Centisome position: 20.11
GC content: 37.41
Gene sequence:
>417_bases TTGAAAACGTATATTTACAAATTTATTTTGAGTTTAGTATTGATTGTACCTTCCTTACTTATTCATGCTGCATGTTTAAA CGAAGGTGATGCGGTAAAGTTATCCGGTAGCTTGAAAAAAGAAGTTTTTTTTGGCCCTCCAGGCTGGGGAGAGGATCCCA AAAATGATAAGAAGCTAACTTACTGGATTTTACATCTTGATAATCCATTAACATGTGTCATAGAGGCAAATGATACCCAA GAAGGATGGGGAAATGATGTCCAACTTATTCTTGAAAATAATGAGTATGAGGATTATCGCCAGTTTCTTGAAAAACAGGT CAGTGTAAGCGGTCGTATCTTTCTGGCCCAGACTGGGTACCATATGACACCTGTTCTGTTGGATGATATTTCATCAGTTT CGCGAACTAATCAATAG
Upstream 100 bases:
>100_bases ATCCTTATTTCGAAAATATCGCTCAAGAACAACAAAGTAATAGATTGCCTGATACAATAATTAATAAATTTATTGGCTAT GTAGAAGAGGATATCTAGTA
Downstream 100 bases:
>100_bases TGGAAAAAATGAAACCAGTTAAATTTATAACGGCTACTAACCATCAGAATAAAAAGACTGTCGAATATGAAGCCGATGAT GGTTCAATTTTATTAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKTYIYKFILSLVLIVPSLLIHAACLNEGDAVKLSGSLKKEVFFGPPGWGEDPKNDKKLTYWILHLDNPLTCVIEANDTQ EGWGNDVQLILENNEYEDYRQFLEKQVSVSGRIFLAQTGYHMTPVLLDDISSVSRTNQ
Sequences:
>Translated_138_residues MKTYIYKFILSLVLIVPSLLIHAACLNEGDAVKLSGSLKKEVFFGPPGWGEDPKNDKKLTYWILHLDNPLTCVIEANDTQ EGWGNDVQLILENNEYEDYRQFLEKQVSVSGRIFLAQTGYHMTPVLLDDISSVSRTNQ >Mature_138_residues MKTYIYKFILSLVLIVPSLLIHAACLNEGDAVKLSGSLKKEVFFGPPGWGEDPKNDKKLTYWILHLDNPLTCVIEANDTQ EGWGNDVQLILENNEYEDYRQFLEKQVSVSGRIFLAQTGYHMTPVLLDDISSVSRTNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15663; Mature: 15663
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYIYKFILSLVLIVPSLLIHAACLNEGDAVKLSGSLKKEVFFGPPGWGEDPKNDKKLT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEE YWILHLDNPLTCVIEANDTQEGWGNDVQLILENNEYEDYRQFLEKQVSVSGRIFLAQTGY EEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCC HMTPVLLDDISSVSRTNQ CCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKTYIYKFILSLVLIVPSLLIHAACLNEGDAVKLSGSLKKEVFFGPPGWGEDPKNDKKLT CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCEEE YWILHLDNPLTCVIEANDTQEGWGNDVQLILENNEYEDYRQFLEKQVSVSGRIFLAQTGY EEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCC HMTPVLLDDISSVSRTNQ CCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA