Click here to switch to the map view.

The map label for this gene is sfsB [H]

Identifier: 153949818

GI number: 153949818

Start: 4079611

End: 4079886

Strand: Direct

Name: sfsB [H]

Synonym: YpsIP31758_3615

Alternate gene names: 153949818

Gene position: 4079611-4079886 (Clockwise)

Preceding gene: 153949434

Following gene: 153949241

Centisome position: 86.37

GC content: 49.64

Gene sequence:

>276_bases
ATGATTTTAAGGAAATCTGATTGGCACCCAGCCGACATCATTGCTGCACTACGTAAGAAAGGTACGACTCTGGCAGCCCT
TTCCCGCAAGGCAGGATTAAGCTCTTCTACGCTCGCCAATGCATTGACGCGACCTTGGCCGAAAGGCGAGTGGTTGATTG
CAGAGTGTCTGGATATTCATCCTTCGGAGATCTGGCCAACACGTTATTTTGACCCCAAGACAGGGAATCTCCTTGATCGC
AAAGTAAGGATACGACCAACCACAACGCAGCCATAA

Upstream 100 bases:

>100_bases
ATCTTTCTAAATGATTGCTTTTTGTTCACTGTATAATTAACGATGTACCGTTATTTATATCACTAACACGTCAGCAGCTT
AGAAAAAAAAAGGATTAAAG

Downstream 100 bases:

>100_bases
AAAAACCCATCAGCTTACCGCTCACAGGGTGGGGGGTGAACGTCTTATTACACCGCCGATAAATCTCATAACGACGGGCA
GTATCATTACAATATCAGGG

Product: sugar fermentation stimulation protein B

Products: NA

Alternate protein names: Ner-like protein [H]

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIHPSEIWPTRYFDPKTGNLLDR
KVRIRPTTTQP

Sequences:

>Translated_91_residues
MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIHPSEIWPTRYFDPKTGNLLDR
KVRIRPTTTQP
>Mature_91_residues
MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIHPSEIWPTRYFDPKTGNLLDR
KVRIRPTTTQP

Specific function: This protein is involved in positive regulation of the metabolism of sugars [H]

COG id: COG3423

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ner transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1789579, Length=82, Percent_Identity=64.6341463414634, Blast_Score=109, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010982 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10261; Mature: 10261

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIH
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEHHHHCC
PSEIWPTRYFDPKTGNLLDRKVRIRPTTTQP
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MILRKSDWHPADIIAALRKKGTTLAALSRKAGLSSSTLANALTRPWPKGEWLIAECLDIH
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEHHHHCC
PSEIWPTRYFDPKTGNLLDRKVRIRPTTTQP
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]