| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is gltJ [H]
Identifier: 153949784
GI number: 153949784
Start: 4700282
End: 4701019
Strand: Reverse
Name: gltJ [H]
Synonym: YpsIP31758_4164
Alternate gene names: 153949784
Gene position: 4701019-4700282 (Counterclockwise)
Preceding gene: 153946989
Following gene: 153948328
Centisome position: 99.53
GC content: 49.32
Gene sequence:
>738_bases ATGAATCTACATCATCTGACTGATTGGCTATTAGCCCCGCAATATCTTGGTTGGTTGTGGGATGGTTTCCTACTGACGTT GTGGATTTCCGCCTGTACGGTGGTGGCTGCCACGTTATTGGGATTTTTGCTGGCCGCGGCCAGAGATAGCGAGTTAAAAG CCTTGAAAGGCTTTGCTATTGGCTACAGTGCCTTATTCCGAAATACTCCTCTGCTGATCCAATTATTCTTTTGGTACTTT GCTGCCAGCCAATTCCTGCCAGCTTCTTGGATCCCTTGGCTCAATACTCCCCATGAAATTACGGTTGCCGAATTAACTCT GGCCTGGCCCTCTTTTGAGTTTTTAGCCGGTTTTGTCGGGTTGACACTCTATTCCACCGCATTTATTGCTGAAGAGCTGC GTGCGGGCATCAGCGGCGTAGCCAAGGGGCAGAAATATGCTGCACATGCGCTGGGGCTGACGGGGTGGCAATCGATGCGG TATGTGGTTTTGCCGCAGGCTTTGAAAATAGCCATGCCTCCGTTGCTGGGCCAATATATGAATATTATTAAAAACTCTTC ATTGGCAATGGCGATTGGTGTAGCTGAACTCTCCTATGCTTCCCGGCAGGTTGAAACTGAAACATTACGGACGTTTCAGG CATTCGGGGTTGCAACCCTATTGTATATTTTCATCATCGCGCTAATTGAGGCTTGGGGTATGTGGCGTCAACAGCGAACT GTCGTCCGAGGGCACTGA
Upstream 100 bases:
>100_bases GTCGGTATATTAAGTTATGAAGTAAAAATAAGATGGATTTTATTGTGTACTTAAAAACTCATGCGATTAGAGCATCAGAT GGATATAGATATAAAAGCCT
Downstream 100 bases:
>100_bases GATGGATTTTACCATTATCGTTGATAACTGGCGTTATCTGCTGTGGGGGACTTTCCCTGATGGCCCTCTGGGAGGGGCGG CATTGACCGTGGTGATCAGT
Product: polar amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYF AASQFLPASWIPWLNTPHEITVAELTLAWPSFEFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMR YVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT VVRGH
Sequences:
>Translated_245_residues MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYF AASQFLPASWIPWLNTPHEITVAELTLAWPSFEFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMR YVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT VVRGH >Mature_245_residues MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAIGYSALFRNTPLLIQLFFWYF AASQFLPASWIPWLNTPHEITVAELTLAWPSFEFLAGFVGLTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMR YVVLPQALKIAMPPLLGQYMNIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT VVRGH
Specific function: Part of the binding-protein-dependent transport system for aspartate/glutamate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786874, Length=216, Percent_Identity=35.1851851851852, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI48994930, Length=306, Percent_Identity=29.7385620915033, Blast_Score=120, Evalue=6e-29, Organism=Escherichia coli, GI1788226, Length=208, Percent_Identity=35.0961538461538, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1786873, Length=189, Percent_Identity=31.7460317460317, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787030, Length=221, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI87082239, Length=205, Percent_Identity=29.2682926829268, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=27.6497695852535, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787087, Length=210, Percent_Identity=22.8571428571429, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27349; Mature: 27349
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GYSALFRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITVAELTLAWPSFEFLAGFVG HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH LTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH NIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVRGH HHCCC >Mature Secondary Structure MNLHHLTDWLLAPQYLGWLWDGFLLTLWISACTVVAATLLGFLLAAARDSELKALKGFAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GYSALFRNTPLLIQLFFWYFAASQFLPASWIPWLNTPHEITVAELTLAWPSFEFLAGFVG HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH LTLYSTAFIAEELRAGISGVAKGQKYAAHALGLTGWQSMRYVVLPQALKIAMPPLLGQYM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHH NIIKNSSLAMAIGVAELSYASRQVETETLRTFQAFGVATLLYIFIIALIEAWGMWRQQRT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVRGH HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamate [Periplasm] + H2O = ADP + phosphate + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]