Click here to switch to the map view.

The map label for this gene is yqiG [H]

Identifier: 153949755

GI number: 153949755

Start: 4631862

End: 4634354

Strand: Reverse

Name: yqiG [H]

Synonym: YpsIP31758_4106

Alternate gene names: 153949755

Gene position: 4634354-4631862 (Counterclockwise)

Preceding gene: 153947487

Following gene: 153949285

Centisome position: 98.12

GC content: 45.97

Gene sequence:

>2493_bases
ATGCCATATAATTCTAAAAGAAAAAAAACCATCTTCCTAATGGTGAAAGTATTAACAATAATTTTAGTATGGTTATTTTT
GCCTGAATCGACTGCAGTAGTAAAATTCAATACCAATATTATCGATGCTAAAGACCGTAGTAATATCGATCTCTCTCGTT
TTGAGGTTGATGATTACACCCCACCGGGGAATTATCTCCTTGATATTCTTATTGATGATAGGCTGTTACCTGAACGTTAT
TTAGTGACTTATCTCGCTGTTGATGAAGGGAAATCAACGAAGCTCTGTTTGACGCCTGACTTAGTTAATCTATTTGGTTT
ATCTACGGAAGTACGTGAGTCGATGACATTATGGAATAACGACAAGTGTGTTGCTATTGATGAAAAAAAAGAGATAAAAA
TTCAGTACGATAAAGAGAAGCAATCCTTAATTATTTCTATTCCCCAAGCTTGGCTGGCTTATAACGATCCCAATTGGGTG
CCGCCTTCACAATGGGGAAACGGTGTTGCTGGTACTTTATTGGATTACAATTTGTTTGGTTATCATTACTCACCGAATAT
GGGCGGCAGTACCACAAATTTCAGCAGCTACGGCACTACCGGGGCTAATATGGGACCATGGCGTATTCGTGCAGATTACC
AATATATCAATACAGAAACGGCGGGCGAGCACTACCGTAATTTTGATTGGTCGCAAGTGTATGCTTTTCGAGCCATCCCC
TCGATAGGGGCTAAATTTGTCGGTGGCCAGACTTATCTCAACTCCAGTATTTTTGATTCATTCCGTTTTCTGGGCACTTC
ACTTTCCAGTGATGAGCGCATGTTGCCACCGACGTTACGCGGCTATGCACCACAGGTAATGGGCATTGCTCACACCAACG
CCCGCGTGGTATTGAGCCAGAATGGGCGGGTGCTTTATCAGACTAACGTTGCACCAGGCCCCTTTGTTATTCAAGACATT
AGCGAAGCCGTACAAGGGAATATTGATGTCCGCGTGGAAGAGGAAGATGGCCGGGTCACCGTGTTTCAAGTCAACGCCGC
GAGCGTGCCATTTTTAACCCGTAAAGGTGCCGTGCGCTATAAAGCTGCGTTGGGTCGCCCGATGCTGGGTAATTCAGCCA
GTAATCCGACATTCTTTAGTGGCGAATTCTCGTGGGGCGCATTTAACCATGTTTCATTATACGGTGGGCTGATGACGACT
TCGCAGGATTACACCTCGGCTGCGTTGGGCATCGGGCAAAATTTATATGACTTCGGCGCACTGTCTATTGATATCACCCA
TTCCCGTGCGCAGTTACCAAATGAAGAACAGCAGAACGGGGAAAGCTATCGCGTTAATTATTCCAAACGTTTTGAGCAGA
CTGACAGCCAGATTAGCTTTGCCGGATACCGTTTCTCGAAGAAGAATTTTATGAGTATGAGCCAGTATTTGGATTGGCTA
AACGGCAATACTGCTCTGCAATATGACAAGCAGGCTTATACCGTGGCAGCTAACCAGTATCTGGCCTGGCCGGATATCAC
GATGTATTTATCGGTGACACGTAGAACCTATTGGAATGCGGCCTCCAGTAACAACTACAGTCTATCCATGAGCAAGATTT
TTGATATCGGTACTTTTAAGGGTATTTCGGCGACGATATCCGCTAATAAGGTGAATAATCAGTATGCCAATGAGAATCAA
ATGTTCTTCTCACTCAGCGTACCGATCGGCATAGGCCAGCAGGCCAGCTATGATGCACAGCGAGGCCGCAATACCGGCTA
CACGCAAAATATCTCCTATTTCAACAACCAGAATCCGAAAAATATTTGGCGTATCAGCGCGGGTGGCGGTAACCCAGAAC
TGCAAAAAGGTAATGGTGTGTTCCGTGGTGGCTATCAACATAGCTCGCCTTATGGTGAATTTGGTCTTGATGGCAGTCAT
AAAAATAATGAGTACAACTCAATCAATACCAACTGGTATGGCTCAATTACGGCAACCGCTTATGGGGTTGCTGCCCACCA
GAATAAAGCGGGCAATGAACCAAGAATAATGGTTGATACCGGGGATGTCGCAGGGGTGTCGCTGAATAATAACTCGGCAG
TGACGAACCGTTTTGGTGTGGCGGTGGTCAGTGGCGCAACCAGCTACCAACAGTCTGATATTCGGGTGGATGTGCAGAAT
CTGCCGGATGATATTGAGGTCTACAACACCGTTATCCAAAAAACGCTGACCGAAGGGGCAATTGGTTACCGTGAGATAAG
GGCGGTAAAAGGTCGGCAAATGATGGCGATTATTCGCCTGAAAGATGGCAGTTCCCCCCCCTTGGGGGCATCCGTTATCA
CGGACAAAACGGGCGCTGAAGTTGGAATTGTGGGAGACGATGGCCTGACGTATTTGGCGGGATTACAAGACACTGAGAGG
CTGACTGTTCAATGGGGGAAAAAACAGTGCACGCTCATATTGCCAAAAGATAAAGGAATGAACTCAGGAAAGGTACTACT
GCCCTGCCAGTAA

Upstream 100 bases:

>100_bases
AACCTATGCTCTGAATTATAAATAACAAATGTTTAAAGTAATTAAAGGGGAGGTAACTCCCCTCTAATTAATATTATCGC
CATAAGACAATGGTTTATAT

Downstream 100 bases:

>100_bases
GTATTTTTGGGGAAAAATATTCATTAAAACGGTTGTTGATCGAAACTGAGTTATTCACAGCCAAATGCGGCCTTTTACAG
TGGAATAGCGAAATGAAAGA

Product: fimbrial usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 830; Mature: 829

Protein sequence:

>830_residues
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERY
LVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWV
PPSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDI
SEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKAALGRPMLGNSASNPTFFSGEFSWGAFNHVSLYGGLMTT
SQDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLDWL
NGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANENQ
MFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSH
KNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQN
LPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDTER
LTVQWGKKQCTLILPKDKGMNSGKVLLPCQ

Sequences:

>Translated_830_residues
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERY
LVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWV
PPSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDI
SEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKAALGRPMLGNSASNPTFFSGEFSWGAFNHVSLYGGLMTT
SQDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLDWL
NGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANENQ
MFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSH
KNNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQN
LPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDTER
LTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
>Mature_829_residues
PYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYTPPGNYLLDILIDDRLLPERYL
VTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNNDKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWVP
PSQWGNGVAGTLLDYNLFGYHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIPS
IGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQNGRVLYQTNVAPGPFVIQDIS
EAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRYKAALGRPMLGNSASNPTFFSGEFSWGAFNHVSLYGGLMTTS
QDYTSAALGIGQNLYDFGALSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLDWLN
GNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFKGISATISANKVNNQYANENQM
FFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPKNIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSHK
NNEYNSINTNWYGSITATAYGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQNL
PDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAEVGIVGDDGLTYLAGLQDTERL
TVQWGKKQCTLILPKDKGMNSGKVLLPCQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI87081778, Length=816, Percent_Identity=40.1960784313725, Blast_Score=619, Evalue=1e-178,
Organism=Escherichia coli, GI1786332, Length=841, Percent_Identity=27.2294887039239, Blast_Score=307, Evalue=1e-84,
Organism=Escherichia coli, GI1790772, Length=869, Percent_Identity=26.92750287687, Blast_Score=279, Evalue=6e-76,
Organism=Escherichia coli, GI1787172, Length=802, Percent_Identity=26.9326683291771, Blast_Score=268, Evalue=9e-73,
Organism=Escherichia coli, GI1786744, Length=840, Percent_Identity=27.3809523809524, Blast_Score=262, Evalue=8e-71,
Organism=Escherichia coli, GI1789533, Length=795, Percent_Identity=27.6729559748428, Blast_Score=234, Evalue=2e-62,
Organism=Escherichia coli, GI1788427, Length=858, Percent_Identity=24.5920745920746, Blast_Score=210, Evalue=3e-55,
Organism=Escherichia coli, GI1789610, Length=722, Percent_Identity=22.4376731301939, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92096; Mature: 91965

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYT
CCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCEEEEEECCCC
PPGNYLLDILIDDRLLPERYLVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNN
CCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHCCCHHHHHHHHEECC
DKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWVPPSQWGNGVAGTLLDYNLFG
CCEEEECCCCEEEEEECCCCCEEEEEECHHHEEECCCCCCCCHHCCCCCEEEEEEEEEEE
YHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCHHHCCCCHHHEEEECCCC
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQ
CCCCEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCEEEEEECCEEEEEEC
NGRVLYQTNVAPGPFVIQDISEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRY
CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEECCCCEEE
KAALGRPMLGNSASNPTFFSGEFSWGAFNHVSLYGGLMTTSQDYTSAALGIGQNLYDFGA
HHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCEEECCCCHHHHHHHCCCCCHHCCE
LSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLDWL
EEEEEECHHHCCCCHHHHCCCEEEEEHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHH
NGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFK
CCCEEEEECCCEEEEECCCEEECCCEEEEEEEEHHEEECCCCCCCEEEEHHHEEECCCCC
GISATISANKVNNQYANENQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPK
CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCEECEEECCCCCCC
NIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITATA
EEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
YGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQN
EEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEEECCC
LPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAE
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCCCE
VGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
EEEECCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEECC
>Mature Secondary Structure 
PYNSKRKKTIFLMVKVLTIILVWLFLPESTAVVKFNTNIIDAKDRSNIDLSRFEVDDYT
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCEEEEEECCCC
PPGNYLLDILIDDRLLPERYLVTYLAVDEGKSTKLCLTPDLVNLFGLSTEVRESMTLWNN
CCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHCCCHHHHHHHHEECC
DKCVAIDEKKEIKIQYDKEKQSLIISIPQAWLAYNDPNWVPPSQWGNGVAGTLLDYNLFG
CCEEEECCCCEEEEEECCCCCEEEEEECHHHEEECCCCCCCCHHCCCCCEEEEEEEEEEE
YHYSPNMGGSTTNFSSYGTTGANMGPWRIRADYQYINTETAGEHYRNFDWSQVYAFRAIP
EEECCCCCCCCCCCCCCCCCCCCCCCEEEEECEEEECCCCCCHHHCCCCHHHEEEECCCC
SIGAKFVGGQTYLNSSIFDSFRFLGTSLSSDERMLPPTLRGYAPQVMGIAHTNARVVLSQ
CCCCEECCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCEEEEEECCEEEEEEC
NGRVLYQTNVAPGPFVIQDISEAVQGNIDVRVEEEDGRVTVFQVNAASVPFLTRKGAVRY
CCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCCCCEEECCCCEEE
KAALGRPMLGNSASNPTFFSGEFSWGAFNHVSLYGGLMTTSQDYTSAALGIGQNLYDFGA
HHHCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCEEECCCCHHHHHHHCCCCCHHCCE
LSIDITHSRAQLPNEEQQNGESYRVNYSKRFEQTDSQISFAGYRFSKKNFMSMSQYLDWL
EEEEEECHHHCCCCHHHHCCCEEEEEHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHH
NGNTALQYDKQAYTVAANQYLAWPDITMYLSVTRRTYWNAASSNNYSLSMSKIFDIGTFK
CCCEEEEECCCEEEEECCCEEECCCEEEEEEEEHHEEECCCCCCCEEEEHHHEEECCCCC
GISATISANKVNNQYANENQMFFSLSVPIGIGQQASYDAQRGRNTGYTQNISYFNNQNPK
CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCEECEEECCCCCCC
NIWRISAGGGNPELQKGNGVFRGGYQHSSPYGEFGLDGSHKNNEYNSINTNWYGSITATA
EEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
YGVAAHQNKAGNEPRIMVDTGDVAGVSLNNNSAVTNRFGVAVVSGATSYQQSDIRVDVQN
EEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEEECCC
LPDDIEVYNTVIQKTLTEGAIGYREIRAVKGRQMMAIIRLKDGSSPPLGASVITDKTGAE
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCCCE
VGIVGDDGLTYLAGLQDTERLTVQWGKKQCTLILPKDKGMNSGKVLLPCQ
EEEECCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]