| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949746
Identifier: 153949746
GI number: 153949746
Start: 2541239
End: 2542255
Strand: Reverse
Name: 153949746
Synonym: YpsIP31758_2228
Alternate gene names: NA
Gene position: 2542255-2541239 (Counterclockwise)
Preceding gene: 153947596
Following gene: 153950319
Centisome position: 53.82
GC content: 44.94
Gene sequence:
>1017_bases ATGAAAAAACCGGATTGGGGAGCGATAAAGCGCGAATACTGTACCGGGCTGCTCTCTGTTCGTGCATTAGCTAAAAAGTA CGATGTAAGTGATACAGCAATACGGAAGAAGGCTAAAGCCGACAGTTGGCCTAAGCCCGAAAAGGTTCGCAAAACAGGTT CGCATAATTCCTGTGCGAACCTGCGAACCAAGACTAAAAAATTAATTTCTCCAATTGAAAACCAAATTGATGCAAATTGC TCACCAAATGAAAATCAAATTGAAGAAAGCTGCTCTATTGCCCGTAGATATGGGCTTAACGATATGCAGGCAAAATTCGT CAGTGAATATTTAATTGATTTAGATAAAACGGCTGCTTATAAACGGGCCGGATATAAATGTAAGGGATTAACCGGTGCCG CTGCTGCCCGTCGACTGTATCGTCACGTATCAGTAAACAAAGCCATACACGATACCATGGCGGCAAGAGAAAGAAGGACA CATATCACGCAGGATGCTGTTTTAAGCTGGTGGTGGGATATTGCAACAGCCAACGCCAACGAAATTTCAGAGTTTCGCCG TTTATGCTGCCGTCACTGTTGGGGCATTGAAAATAAATACCAGTGGATTAACGAGCAGGAATATCAGGAAGAATCAGAGA AAAGAACCAATAACGGAAAACCTGCGCCACTGGATGATGGCGGTTATGGTTTTGACAGCACGCTCGATCCCAATCCGGAT TGTCCACGTTGTAATGGGGAGGGACAAGGCAGGGCACATTTTCATGATTCGCGTGATTTATCGGTTTCAGCCCGTCGTCT TTATGCTGGTGTTAAGCAAGGTAAGTTTGGCTTAGAGGTCATTACCCGTAATCAGGACGACGCGTTAAAAATGGTTGGGC AGCATTTGGGTATGCTGAAAAATAAAACCGAAATCAGCGGCCCTGATGGTGGTGCCATTAACCAGGTGAATTACAAGCCA GAAGATTATTCGAACGCTCAGCAGATGTTAGAGGGTAAATTGCCGGGGTTGGATTGA
Upstream 100 bases:
>100_bases AGCCGACCTGTCAAATTCGCTTTTTATCAAAGCCAAGAAAGGCGACACGCGAGCCATGATTTTCTTGCTGGAATATTTAA AACCAAAATGTGAGTAAAAA
Downstream 100 bases:
>100_bases ATACTGACAATCAGACGCGCTTGCCAGCTTCACTGTAGGCTTCTTCACGATCCCGTTTACCCACGGCAACCACAAAAACC GTGATTTTTTCGTCTTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKKPDWGAIKREYCTGLLSVRALAKKYDVSDTAIRKKAKADSWPKPEKVRKTGSHNSCANLRTKTKKLISPIENQIDANC SPNENQIEESCSIARRYGLNDMQAKFVSEYLIDLDKTAAYKRAGYKCKGLTGAAAARRLYRHVSVNKAIHDTMAARERRT HITQDAVLSWWWDIATANANEISEFRRLCCRHCWGIENKYQWINEQEYQEESEKRTNNGKPAPLDDGGYGFDSTLDPNPD CPRCNGEGQGRAHFHDSRDLSVSARRLYAGVKQGKFGLEVITRNQDDALKMVGQHLGMLKNKTEISGPDGGAINQVNYKP EDYSNAQQMLEGKLPGLD
Sequences:
>Translated_338_residues MKKPDWGAIKREYCTGLLSVRALAKKYDVSDTAIRKKAKADSWPKPEKVRKTGSHNSCANLRTKTKKLISPIENQIDANC SPNENQIEESCSIARRYGLNDMQAKFVSEYLIDLDKTAAYKRAGYKCKGLTGAAAARRLYRHVSVNKAIHDTMAARERRT HITQDAVLSWWWDIATANANEISEFRRLCCRHCWGIENKYQWINEQEYQEESEKRTNNGKPAPLDDGGYGFDSTLDPNPD CPRCNGEGQGRAHFHDSRDLSVSARRLYAGVKQGKFGLEVITRNQDDALKMVGQHLGMLKNKTEISGPDGGAINQVNYKP EDYSNAQQMLEGKLPGLD >Mature_338_residues MKKPDWGAIKREYCTGLLSVRALAKKYDVSDTAIRKKAKADSWPKPEKVRKTGSHNSCANLRTKTKKLISPIENQIDANC SPNENQIEESCSIARRYGLNDMQAKFVSEYLIDLDKTAAYKRAGYKCKGLTGAAAARRLYRHVSVNKAIHDTMAARERRT HITQDAVLSWWWDIATANANEISEFRRLCCRHCWGIENKYQWINEQEYQEESEKRTNNGKPAPLDDGGYGFDSTLDPNPD CPRCNGEGQGRAHFHDSRDLSVSARRLYAGVKQGKFGLEVITRNQDDALKMVGQHLGMLKNKTEISGPDGGAINQVNYKP EDYSNAQQMLEGKLPGLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38103; Mature: 38103
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPDWGAIKREYCTGLLSVRALAKKYDVSDTAIRKKAKADSWPKPEKVRKTGSHNSCAN CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCHHH LRTKTKKLISPIENQIDANCSPNENQIEESCSIARRYGLNDMQAKFVSEYLIDLDKTAAY HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KRAGYKCKGLTGAAAARRLYRHVSVNKAIHDTMAARERRTHITQDAVLSWWWDIATANAN HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EISEFRRLCCRHCWGIENKYQWINEQEYQEESEKRTNNGKPAPLDDGGYGFDSTLDPNPD HHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC CPRCNGEGQGRAHFHDSRDLSVSARRLYAGVKQGKFGLEVITRNQDDALKMVGQHLGMLK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH NKTEISGPDGGAINQVNYKPEDYSNAQQMLEGKLPGLD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKKPDWGAIKREYCTGLLSVRALAKKYDVSDTAIRKKAKADSWPKPEKVRKTGSHNSCAN CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCHHH LRTKTKKLISPIENQIDANCSPNENQIEESCSIARRYGLNDMQAKFVSEYLIDLDKTAAY HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KRAGYKCKGLTGAAAARRLYRHVSVNKAIHDTMAARERRTHITQDAVLSWWWDIATANAN HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH EISEFRRLCCRHCWGIENKYQWINEQEYQEESEKRTNNGKPAPLDDGGYGFDSTLDPNPD HHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC CPRCNGEGQGRAHFHDSRDLSVSARRLYAGVKQGKFGLEVITRNQDDALKMVGQHLGMLK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH NKTEISGPDGGAINQVNYKPEDYSNAQQMLEGKLPGLD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA