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The map label for this gene is yhbU [H]

Identifier: 153949621

GI number: 153949621

Start: 4041771

End: 4042766

Strand: Direct

Name: yhbU [H]

Synonym: YpsIP31758_3582

Alternate gene names: 153949621

Gene position: 4041771-4042766 (Clockwise)

Preceding gene: 153949938

Following gene: 153949061

Centisome position: 85.57

GC content: 52.51

Gene sequence:

>996_bases
ATGGAGCTGCTGTGTCCTGCGGGTAACTTACCTGCATTAAAGGCCGCAATCGACAATGGTGCCGATGCGGTTTATATCGG
TTTGAAAGATGATACTAACGCCCGCCATTTTGCCGGCCTCAATTTCACCGATAAAAAGCTACAAGAAGCCGTTAACTACG
TTCATAGCCGTAAACGTAAATTACATATCGCCATTAACACCTTCGCCCACCCTGACGGCTATGCACGCTGGCAACGGGCG
GTGGATATGGCCGCCCAACTTGGAGCTGATGCGCTGATCTTGGCAGACCTGGCGATGCTGGAATATGCTGCTGAACGTTA
TCCGCAGGTTGAGCGCCATGTCTCGGTACAAGCTTCTGCCACCAACGATGAAGCCATCCGCTTTTATCAACGCCATTTCG
ATGTCGCCCGGGTGGTATTGCCGCGTGTGCTCTCAATGCATCAGGTAAAACAGTTATCACGTACCAGCCCGGTTCCGCTG
GAAGTCTTCGCTTTTGGTAGTTTGTGTATTATGGCTGAAGGCCGTTGTTACCTTTCTTCCTATTTGACCGGTGAATCACC
CAATACCGTGGGTGCTTGCTCGCCCGCACGCTTTGTACGTTGGCAACAAACCCCACAAGGGATGGAATCCCGCCTCAACG
ACGTGTTGATTGACCGCTACGAAGACCATGAAAATGCCGGTTATCCTACACTGTGCAAAGGCCGCTATCGGGTAGATGGC
CAGCGCTACCATGCACTGGAAGAGCCGACGAGCCTGAATACCCTTGAGCTATTACCCGAATTATTTGCTGCCAATATTGC
CTCAGTAAAAATTGAAGGACGCCAGCGCAGCCCAGCCTACGTCAGCCAGGTTGCCAAAGTCTGGCGACAGGCGATTGACC
TCTATCAGGCGAATCCGGCGCAATTTGCCGCCAAAGCAGAATGGATGGAGCAACTGGGCGCAATGTCCGAAGGTACCCAG
ACAACACTGGGCGCTTATCATCGTAAGTGGCAGTAG

Upstream 100 bases:

>100_bases
CTAAAATTGCCGCTCGATAAAATACCAAGATCATCTATGCCCTTACATCTGCAACTTGAATCTGCAACTTGAAGTATGAG
GGGTATATCAGGGAAATTCT

Downstream 100 bases:

>100_bases
CCGGAGGAAATATGAAGTACGCCTTAGGCGCAGTACTCTATTACTGGCCAAAAACTGAGATTGAAACCTTTTATCACGCG
GCGGCCAACAGCAGTGCCGA

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRKLHIAINTFAHPDGYARWQRA
VDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASATNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDG
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPAQFAAKAEWMEQLGAMSEGTQ
TTLGAYHRKWQ

Sequences:

>Translated_331_residues
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRKLHIAINTFAHPDGYARWQRA
VDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASATNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDG
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPAQFAAKAEWMEQLGAMSEGTQ
TTLGAYHRKWQ
>Mature_331_residues
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRKLHIAINTFAHPDGYARWQRA
VDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASATNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPL
EVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDG
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPAQFAAKAEWMEQLGAMSEGTQ
TTLGAYHRKWQ

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1789548, Length=331, Percent_Identity=88.5196374622357, Blast_Score=624, Evalue=1e-180,
Organism=Escherichia coli, GI1788397, Length=319, Percent_Identity=30.7210031347962, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI87081910, Length=293, Percent_Identity=30.3754266211604, Blast_Score=111, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 37116; Mature: 37116

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRK
CCEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCE
LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASA
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECC
TNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPLEVFAFGSLCIMAEGRCYLSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHH
YLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDG
HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEECC
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPA
HHHHCCCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHH
QFAAKAEWMEQLGAMSEGTQTTLGAYHRKWQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MELLCPAGNLPALKAAIDNGADAVYIGLKDDTNARHFAGLNFTDKKLQEAVNYVHSRKRK
CCEECCCCCCCHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCE
LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPQVERHVSVQASA
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHEEEEECC
TNDEAIRFYQRHFDVARVVLPRVLSMHQVKQLSRTSPVPLEVFAFGSLCIMAEGRCYLSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCHHHHH
YLTGESPNTVGACSPARFVRWQQTPQGMESRLNDVLIDRYEDHENAGYPTLCKGRYRVDG
HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCEEECC
QRYHALEEPTSLNTLELLPELFAANIASVKIEGRQRSPAYVSQVAKVWRQAIDLYQANPA
HHHHCCCCCCCCCHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHH
QFAAKAEWMEQLGAMSEGTQTTLGAYHRKWQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]