| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153949597
Identifier: 153949597
GI number: 153949597
Start: 2100921
End: 2101292
Strand: Direct
Name: 153949597
Synonym: YpsIP31758_1816
Alternate gene names: NA
Gene position: 2100921-2101292 (Clockwise)
Preceding gene: 153948605
Following gene: 153950887
Centisome position: 44.48
GC content: 45.7
Gene sequence:
>372_bases ATGGTGAGTTTGATACCGTTTTTCACGGAGCAGGGACGGCTTATGTATAAGATTAGTTTGTTACGGTTGGCACAGAGGGA GTTAGTAAGATTACCCGTAGGCATACAGGCGGTACTGATTAAGGCGATGGATGAGCTTGAAGCTTGTGGTCATGAACTGA GAGAGCCTTATGTACGGGATATGGGGCAGGGGTTAAAAGAATTACGCGTAAGCGCTAAAGAAGGTATCGGGCGTGGTTTT TTCTTTTGCCACCTCCATCGGCAGGTTTATATCATTCACCTCCTACAGAAAAAAACACAGAAAACCCCAAGACGGACACT GATATTGGCTTATCGGCGCATGAAAGAACTCAAACGGAGATTGCAGTCATGA
Upstream 100 bases:
>100_bases GGTTATTGCATCAACTTAATGACTGGCGGTATACCTGCGCTGAGGGATCAGACGGTTGTTGAAAGTTTGTCTGATTCTGG GTCACCATATTTGATTACCT
Downstream 100 bases:
>100_bases AAAAAACAGACGATTTTGACATCATTCCTTTTGCGGTGGTTAAAGCAGCAGCGTTGAGTCATCCGCAGGTGAATGACGCC TATACGGATTTACAAATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MVSLIPFFTEQGRLMYKISLLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRDMGQGLKELRVSAKEGIGRGF FFCHLHRQVYIIHLLQKKTQKTPRRTLILAYRRMKELKRRLQS
Sequences:
>Translated_123_residues MVSLIPFFTEQGRLMYKISLLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRDMGQGLKELRVSAKEGIGRGF FFCHLHRQVYIIHLLQKKTQKTPRRTLILAYRRMKELKRRLQS >Mature_123_residues MVSLIPFFTEQGRLMYKISLLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRDMGQGLKELRVSAKEGIGRGF FFCHLHRQVYIIHLLQKKTQKTPRRTLILAYRRMKELKRRLQS
Specific function: Unknown
COG id: COG4679
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14505; Mature: 14505
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLIPFFTEQGRLMYKISLLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGQGLKELRVSAKEGIGRGFFFCHLHRQVYIIHLLQKKTQKTPRRTLILAYRRMKELKRR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LQS HCC >Mature Secondary Structure MVSLIPFFTEQGRLMYKISLLRLAQRELVRLPVGIQAVLIKAMDELEACGHELREPYVRD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MGQGLKELRVSAKEGIGRGFFFCHLHRQVYIIHLLQKKTQKTPRRTLILAYRRMKELKRR HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LQS HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA