| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949567
Identifier: 153949567
GI number: 153949567
Start: 4336377
End: 4337162
Strand: Reverse
Name: 153949567
Synonym: YpsIP31758_3850
Alternate gene names: NA
Gene position: 4337162-4336377 (Counterclockwise)
Preceding gene: 153948704
Following gene: 153950025
Centisome position: 91.82
GC content: 42.11
Gene sequence:
>786_bases GTGCGTCCAATCATAACTCAGACCGTGCAACCAGTGACTTCGATGTATCCATCACTACCAAAAGCCTTTATCCAAGATAA GGTTATGTTATCGCTACATAATAAAGCTGCGTTAGACAGCACCATTAAAGGCGACGCAGTGAGAGCTCTTCTCTTACACG CTTATGTAGATATCAAAGGTAATGAAGTGGAAAGGCGCACCACTGCGGTAGGTATTCAAAAGCTCTATGAGGAAGTATTG CAGGAATTGTTATATCAGGATCCTAAGTGTATATCAGTCATGATATCGCACACCGCTAACCCACCAACCCCCCTGAGTAT TGCTAGCCCTGAGCGAGTGATGCAGATGATGCACCAGAATATTCGGCAGGATATTGCCAGCCAAAAAACAATAACTGACC GCACGCAGACTCTCCATAATTTACTGTCGTATAAGAATCAATTTCAATATAAAGCCATCTATGACCAGCCAAGATTAAAG CCTGAAGAAAACTATAACTTTAAGATGGTTAATGATGTACATGAAAATCTGCATTCTATTCAAACAGACAGCTGTTGTAA GGCTGGAGCGTTAACGGGTGCTACCTATTTTCTACAAGACTCTCCAGGGGAAATTCATGTATTTGGCATTCGCATTACTC AAGCGAATGAAGAAAGCGGGAAGGTTGAATTATTTCAGGGTTTGAAAAGTGATGTTCAAACAAACAATAAACTGGACTCG TTGTACCTATTGTTGCGCGGGAATAGCCACCAATCTCCCGATGATATCTCGAGTTCAGTCGGTTGA
Upstream 100 bases:
>100_bases GCCAATAGCATTTTAAAATCAATATCTTGCTATTGCTTGTGAAAGAAAGGGGGGATGCAATGACGTACTTTCTTTATTTC TAATCCATAGGAGTAAAAAA
Downstream 100 bases:
>100_bases TAATGAGCAACTCAAGAGGGTGATTCAGGAAAGAGCCATCTGACATGCTACAATTCCGTTTTGTAATATAATGCCACTTT ATAATACAAGGCCGTCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MRPIITQTVQPVTSMYPSLPKAFIQDKVMLSLHNKAALDSTIKGDAVRALLLHAYVDIKGNEVERRTTAVGIQKLYEEVL QELLYQDPKCISVMISHTANPPTPLSIASPERVMQMMHQNIRQDIASQKTITDRTQTLHNLLSYKNQFQYKAIYDQPRLK PEENYNFKMVNDVHENLHSIQTDSCCKAGALTGATYFLQDSPGEIHVFGIRITQANEESGKVELFQGLKSDVQTNNKLDS LYLLLRGNSHQSPDDISSSVG
Sequences:
>Translated_261_residues MRPIITQTVQPVTSMYPSLPKAFIQDKVMLSLHNKAALDSTIKGDAVRALLLHAYVDIKGNEVERRTTAVGIQKLYEEVL QELLYQDPKCISVMISHTANPPTPLSIASPERVMQMMHQNIRQDIASQKTITDRTQTLHNLLSYKNQFQYKAIYDQPRLK PEENYNFKMVNDVHENLHSIQTDSCCKAGALTGATYFLQDSPGEIHVFGIRITQANEESGKVELFQGLKSDVQTNNKLDS LYLLLRGNSHQSPDDISSSVG >Mature_261_residues MRPIITQTVQPVTSMYPSLPKAFIQDKVMLSLHNKAALDSTIKGDAVRALLLHAYVDIKGNEVERRTTAVGIQKLYEEVL QELLYQDPKCISVMISHTANPPTPLSIASPERVMQMMHQNIRQDIASQKTITDRTQTLHNLLSYKNQFQYKAIYDQPRLK PEENYNFKMVNDVHENLHSIQTDSCCKAGALTGATYFLQDSPGEIHVFGIRITQANEESGKVELFQGLKSDVQTNNKLDS LYLLLRGNSHQSPDDISSSVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29373; Mature: 29373
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPIITQTVQPVTSMYPSLPKAFIQDKVMLSLHNKAALDSTIKGDAVRALLLHAYVDIKG CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC NEVERRTTAVGIQKLYEEVLQELLYQDPKCISVMISHTANPPTPLSIASPERVMQMMHQN CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH IRQDIASQKTITDRTQTLHNLLSYKNQFQYKAIYDQPRLKPEENYNFKMVNDVHENLHSI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHC QTDSCCKAGALTGATYFLQDSPGEIHVFGIRITQANEESGKVELFQGLKSDVQTNNKLDS CCCHHHHHCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCE LYLLLRGNSHQSPDDISSSVG EEEEEECCCCCCCHHHHCCCC >Mature Secondary Structure MRPIITQTVQPVTSMYPSLPKAFIQDKVMLSLHNKAALDSTIKGDAVRALLLHAYVDIKG CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC NEVERRTTAVGIQKLYEEVLQELLYQDPKCISVMISHTANPPTPLSIASPERVMQMMHQN CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH IRQDIASQKTITDRTQTLHNLLSYKNQFQYKAIYDQPRLKPEENYNFKMVNDVHENLHSI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHC QTDSCCKAGALTGATYFLQDSPGEIHVFGIRITQANEESGKVELFQGLKSDVQTNNKLDS CCCHHHHHCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCE LYLLLRGNSHQSPDDISSSVG EEEEEECCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA