| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949516
Identifier: 153949516
GI number: 153949516
Start: 4215620
End: 4216819
Strand: Reverse
Name: 153949516
Synonym: YpsIP31758_3743
Alternate gene names: NA
Gene position: 4216819-4215620 (Counterclockwise)
Preceding gene: 153947878
Following gene: 153949718
Centisome position: 89.28
GC content: 50.08
Gene sequence:
>1200_bases ATGGGATTACCGCCAGACAGCATCGTTGAATTCACGCTGTTAAGAATGCAAACAAATCTCGCGAAACGTACCTCAGAGAA TGAGGTGACCCGCGAGCGCAGTGGCTTACTTTTTCTTGGAAACGTACATGATGCGTTTCCCCGCCGGTTATTTATGGATA CGCGGCTCTCCCCTTTGGATAAAACCGCCTGGGTGATGATCCGTCTCTATGCGCAGCAGCATGAGGGGGCCATCTTCCCA ACGTATGATGAGCTGCAACTGCAATTGGCCTCGCCACATGCGGAAAAAGCGTCACGTGAAACCATCAGTCGTGCGTTATT AATGTTACGAATTACCGGTTGGTTGAGTCTGTGTAAACGTGTCCGTGATACCCATGGACGCGTCAGGGGAAATATCTACG CCCAGCACGATGAGCCTCTTAGCTGCCGGGATGCCGAAACTTTTGATCCAGGTTGGTTGGATCTTGTGGCATCAAGCTGT GGGCATAAGAATAAAGCGGTTCGTCTGACCGCACGGGCGGTATTGAGTGAAATTCGTCATGACCCGACGATGCGCCATCG CCATTCCCGTTTGGATATGATTGAAAATCGGTTGGGAGCCGTTGCCACGCCGGTACAAATGGCAGCGTTGCGCCGAGAGT CTGTGCCGAGTTCGAATTCCGAACTCAGTAAAAAGAACACAGAGAATGAGGATAAAACACGGAGTTCGGATACCGAACTC AGTCATAAATCAACCCGTTACCCCGAAGTTCGAAAATCGAACTGTAACGTACGTAATTTCACACAGAGTGTGAATAAAAA AACGTACGTATCCAATGAAAAGGGTGGTAAGGGCTTGCCAGTGCTGGTATTGCCAGATGCTCTGTTGAGCATAATATCTG CGGCAGATGCAGATATGCTGATGGGGCAACTGGAGGGATTGCCTGAAGTTCAGTCATCGGCGCTATTGACGATGCTAAAG GCACAATTGCGTCGTGGGCAATTAAACAATCCGATGGGGTGGCTGCTGAGTATGCTCAAGCGCGCCCGCGATGGTCAGAT GATTGTGCGGGAGACAGATTCCTCTGCACCACCGCAACGGCAAATTTCGACATCGGCTCCTATTATTAGCCACTCTTCAC TACCAGTGGAACTCGCCTCAGCAGAGCAGGTATCCAGTGTTATTGCGGACATAAGAAATAAATTGTTTGGCGGCAAGTGA
Upstream 100 bases:
>100_bases GCATCTTGAAGGGCGACGGGTGTACACCGGTATTTCCGCATAGGGGGCCATTCAGGCCCCGTAGTGCTGTCATTGTCAGA TTCAGAAGAGGCGACCGGCG
Downstream 100 bases:
>100_bases AAAACATGTTCAAAAAATAAGCGTTGCTGCGGGCGGCAGCACTGTATAAAAAAAGAGCAGCGGAAAATTATTGCAGATTG GATGATGGGTTTCACATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MGLPPDSIVEFTLLRMQTNLAKRTSENEVTRERSGLLFLGNVHDAFPRRLFMDTRLSPLDKTAWVMIRLYAQQHEGAIFP TYDELQLQLASPHAEKASRETISRALLMLRITGWLSLCKRVRDTHGRVRGNIYAQHDEPLSCRDAETFDPGWLDLVASSC GHKNKAVRLTARAVLSEIRHDPTMRHRHSRLDMIENRLGAVATPVQMAALRRESVPSSNSELSKKNTENEDKTRSSDTEL SHKSTRYPEVRKSNCNVRNFTQSVNKKTYVSNEKGGKGLPVLVLPDALLSIISAADADMLMGQLEGLPEVQSSALLTMLK AQLRRGQLNNPMGWLLSMLKRARDGQMIVRETDSSAPPQRQISTSAPIISHSSLPVELASAEQVSSVIADIRNKLFGGK
Sequences:
>Translated_399_residues MGLPPDSIVEFTLLRMQTNLAKRTSENEVTRERSGLLFLGNVHDAFPRRLFMDTRLSPLDKTAWVMIRLYAQQHEGAIFP TYDELQLQLASPHAEKASRETISRALLMLRITGWLSLCKRVRDTHGRVRGNIYAQHDEPLSCRDAETFDPGWLDLVASSC GHKNKAVRLTARAVLSEIRHDPTMRHRHSRLDMIENRLGAVATPVQMAALRRESVPSSNSELSKKNTENEDKTRSSDTEL SHKSTRYPEVRKSNCNVRNFTQSVNKKTYVSNEKGGKGLPVLVLPDALLSIISAADADMLMGQLEGLPEVQSSALLTMLK AQLRRGQLNNPMGWLLSMLKRARDGQMIVRETDSSAPPQRQISTSAPIISHSSLPVELASAEQVSSVIADIRNKLFGGK >Mature_398_residues GLPPDSIVEFTLLRMQTNLAKRTSENEVTRERSGLLFLGNVHDAFPRRLFMDTRLSPLDKTAWVMIRLYAQQHEGAIFPT YDELQLQLASPHAEKASRETISRALLMLRITGWLSLCKRVRDTHGRVRGNIYAQHDEPLSCRDAETFDPGWLDLVASSCG HKNKAVRLTARAVLSEIRHDPTMRHRHSRLDMIENRLGAVATPVQMAALRRESVPSSNSELSKKNTENEDKTRSSDTELS HKSTRYPEVRKSNCNVRNFTQSVNKKTYVSNEKGGKGLPVLVLPDALLSIISAADADMLMGQLEGLPEVQSSALLTMLKA QLRRGQLNNPMGWLLSMLKRARDGQMIVRETDSSAPPQRQISTSAPIISHSSLPVELASAEQVSSVIADIRNKLFGGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44581; Mature: 44449
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPPDSIVEFTLLRMQTNLAKRTSENEVTRERSGLLFLGNVHDAFPRRLFMDTRLSPLD CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCC KTAWVMIRLYAQQHEGAIFPTYDELQLQLASPHAEKASRETISRALLMLRITGWLSLCKR HHHHHHHHHHHHHCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRDTHGRVRGNIYAQHDEPLSCRDAETFDPGWLDLVASSCGHKNKAVRLTARAVLSEIRH HHHHCCCEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC DPTMRHRHSRLDMIENRLGAVATPVQMAALRRESVPSSNSELSKKNTENEDKTRSSDTEL CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHCCCCCCHH SHKSTRYPEVRKSNCNVRNFTQSVNKKTYVSNEKGGKGLPVLVLPDALLSIISAADADML CCCCCCCCCHHHCCCCHHHHHHHHCCHHEECCCCCCCCCEEEECHHHHHHHHHHCCHHHH MGQLEGLPEVQSSALLTMLKAQLRRGQLNNPMGWLLSMLKRARDGQMIVRETDSSAPPQR HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCH QISTSAPIISHSSLPVELASAEQVSSVIADIRNKLFGGK HCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GLPPDSIVEFTLLRMQTNLAKRTSENEVTRERSGLLFLGNVHDAFPRRLFMDTRLSPLD CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCC KTAWVMIRLYAQQHEGAIFPTYDELQLQLASPHAEKASRETISRALLMLRITGWLSLCKR HHHHHHHHHHHHHCCCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VRDTHGRVRGNIYAQHDEPLSCRDAETFDPGWLDLVASSCGHKNKAVRLTARAVLSEIRH HHHHCCCEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC DPTMRHRHSRLDMIENRLGAVATPVQMAALRRESVPSSNSELSKKNTENEDKTRSSDTEL CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHCCCCCCHH SHKSTRYPEVRKSNCNVRNFTQSVNKKTYVSNEKGGKGLPVLVLPDALLSIISAADADML CCCCCCCCCHHHCCCCHHHHHHHHCCHHEECCCCCCCCCEEEECHHHHHHHHHHCCHHHH MGQLEGLPEVQSSALLTMLKAQLRRGQLNNPMGWLLSMLKRARDGQMIVRETDSSAPPQR HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCH QISTSAPIISHSSLPVELASAEQVSSVIADIRNKLFGGK HCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA