| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is yuxK [H]
Identifier: 153949394
GI number: 153949394
Start: 2716987
End: 2717409
Strand: Direct
Name: yuxK [H]
Synonym: YpsIP31758_2413
Alternate gene names: 153949394
Gene position: 2716987-2717409 (Clockwise)
Preceding gene: 153950059
Following gene: 153948748
Centisome position: 57.52
GC content: 50.83
Gene sequence:
>423_bases GTGTCCGCTCCGCTGCCCTATATCAAGCCAGGTGAGCGCGTCATCATTTATGATGGTGTCTGCGCGTTGTGTACTGGCTG GGTTAATTTTCTTATTCGCCATGACCGCCGCCACACCGTGCGTCTGTCCGCCGTACAATCGAAAAAAGGCCGCGCATTGC TGGAATGGGCGGGGTTGCCAACTGACAAAATTAACACCCTTGTACTGATTGAAAATCAGCAGGTTTATCTGCGTTCCGAG GCTATCTTTCGCGTAATAGCAAACTTACCGTGGCCATGGCGAATACTCGGTGTGTTGCGTATCTTCCCGCGTCCGTTACG TGATCGATGCTATGACGGCATTGCCCTTAACCGCTACCGTTTATTTGGCCGCTATGATGCCGTCAAGAAGTTAAAAGCGG ATCATGAACGGCGATTCTTATAA
Upstream 100 bases:
>100_bases CCGTAATAAAATATTGTGACCGTAATAAAATACAGTGACCCTAATAAAATACAGTGACTACAATTTTCGAACATCGTTAA ACGCTCTCAGGAGGTAGGTG
Downstream 100 bases:
>100_bases TTCGCTGGTTAGATAACCTCAGCAGTTGCCTTTGCAAGCCAAAACTTTAACGAAAAGATTAACGTGGCAGACAGCAGCGA GAAAAGTGCAAGTGTTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSAPLPYIKPGERVIIYDGVCALCTGWVNFLIRHDRRHTVRLSAVQSKKGRALLEWAGLPTDKINTLVLIENQQVYLRSE AIFRVIANLPWPWRILGVLRIFPRPLRDRCYDGIALNRYRLFGRYDAVKKLKADHERRFL
Sequences:
>Translated_140_residues MSAPLPYIKPGERVIIYDGVCALCTGWVNFLIRHDRRHTVRLSAVQSKKGRALLEWAGLPTDKINTLVLIENQQVYLRSE AIFRVIANLPWPWRILGVLRIFPRPLRDRCYDGIALNRYRLFGRYDAVKKLKADHERRFL >Mature_139_residues SAPLPYIKPGERVIIYDGVCALCTGWVNFLIRHDRRHTVRLSAVQSKKGRALLEWAGLPTDKINTLVLIENQQVYLRSEA IFRVIANLPWPWRILGVLRIFPRPLRDRCYDGIALNRYRLFGRYDAVKKLKADHERRFL
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 16415; Mature: 16283
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLPYIKPGERVIIYDGVCALCTGWVNFLIRHDRRHTVRLSAVQSKKGRALLEWAGLP CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCC TDKINTLVLIENQQVYLRSEAIFRVIANLPWPWRILGVLRIFPRPLRDRCYDGIALNRYR CCCCCEEEEEECCEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCEEEHHHH LFGRYDAVKKLKADHERRFL HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAPLPYIKPGERVIIYDGVCALCTGWVNFLIRHDRRHTVRLSAVQSKKGRALLEWAGLP CCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCC TDKINTLVLIENQQVYLRSEAIFRVIANLPWPWRILGVLRIFPRPLRDRCYDGIALNRYR CCCCCEEEEEECCEEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCEEEHHHH LFGRYDAVKKLKADHERRFL HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]