| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949359
Identifier: 153949359
GI number: 153949359
Start: 643045
End: 643647
Strand: Reverse
Name: 153949359
Synonym: YpsIP31758_0545
Alternate gene names: NA
Gene position: 643647-643045 (Counterclockwise)
Preceding gene: 153950753
Following gene: 153948829
Centisome position: 13.63
GC content: 48.76
Gene sequence:
>603_bases ATGTGTTCCTGGTGTTGGGGCATTTCGCCCACGGTCAGTAAGGTGATGGCCTTTTGTGAAGCCGAAGGTATCGAGTTCTC AATGACGATGGGAGGGCTAAGAGCAGGTGGAGGGGATCCTTGGAATACGGCTTTCAAAGACTTCCTGCACAACGAATGGC GTCATATCGCTCAAGTTACAGGGCAACCATTCGGCTTTACTTTGCTGGACGCCGCCCACTTCGATTATGACACTGAACCC GCATGCCGGGCAGTCATGACGGTTCAGTTACTTCAAACCAGAAAAAACCTGGCTCCTTCAATAGCACTGAAATTTTTCTC AGCAATACAACGCAAGTTCTATGTTGAAGGGAAAGATCCTAAGGTCACGGATTTTTATGCGGATATTTGTGCGAGCATCG GACTGGATTTCGCCGAATTTCGAAACTTGTTCGAGTATTCTGAAGCTCGGCAAGCGGTGCAAGAGGCATTCTTACGTTGC CGCCAATGGAGTGTGAGTTCTTTCCCAACGTTGTTGCTTGAGAGTAATAACAAGATGGCACCTCTTGCCACTGGCTTTGT TACGACAGAGCAAGTGCTTTCTCGATTGCGGCAACGGATCTAG
Upstream 100 bases:
>100_bases TCCCGTCAAGGGTACTTGCCAGTTGCCTGACTTCAAGCCTACCGAAACCGCAGTCCCTGCCATACGCAATGGTGTAGCGG TCCATTACATTGGCGATCCA
Downstream 100 bases:
>100_bases CCAGATTGAAAAAGGATCAATAGTTGAGGTTATTGGCAAAGTGCCCGTGGCGTGGACGCTTTACTCGACTGTCTACCCTC AGCGTTCAAGATCGCGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: DSBA Oxidoreductase; Thioredoxin Domain-Containing Protein; Thioredoxin-Like Fold; Dithiol-Disulfide Isomerase; Thioredoxin; Dsba Oxidoreductase; Protein-Disulfide Isomerase-Like Protein; Thioredoxin Domain-Containing Protein DsbA Family
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MCSWCWGISPTVSKVMAFCEAEGIEFSMTMGGLRAGGGDPWNTAFKDFLHNEWRHIAQVTGQPFGFTLLDAAHFDYDTEP ACRAVMTVQLLQTRKNLAPSIALKFFSAIQRKFYVEGKDPKVTDFYADICASIGLDFAEFRNLFEYSEARQAVQEAFLRC RQWSVSSFPTLLLESNNKMAPLATGFVTTEQVLSRLRQRI
Sequences:
>Translated_200_residues MCSWCWGISPTVSKVMAFCEAEGIEFSMTMGGLRAGGGDPWNTAFKDFLHNEWRHIAQVTGQPFGFTLLDAAHFDYDTEP ACRAVMTVQLLQTRKNLAPSIALKFFSAIQRKFYVEGKDPKVTDFYADICASIGLDFAEFRNLFEYSEARQAVQEAFLRC RQWSVSSFPTLLLESNNKMAPLATGFVTTEQVLSRLRQRI >Mature_200_residues MCSWCWGISPTVSKVMAFCEAEGIEFSMTMGGLRAGGGDPWNTAFKDFLHNEWRHIAQVTGQPFGFTLLDAAHFDYDTEP ACRAVMTVQLLQTRKNLAPSIALKFFSAIQRKFYVEGKDPKVTDFYADICASIGLDFAEFRNLFEYSEARQAVQEAFLRC RQWSVSSFPTLLLESNNKMAPLATGFVTTEQVLSRLRQRI
Specific function: Unknown
COG id: COG3531
COG function: function code O; Predicted protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22621; Mature: 22621
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSWCWGISPTVSKVMAFCEAEGIEFSMTMGGLRAGGGDPWNTAFKDFLHNEWRHIAQVT CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GQPFGFTLLDAAHFDYDTEPACRAVMTVQLLQTRKNLAPSIALKFFSAIQRKFYVEGKDP CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC KVTDFYADICASIGLDFAEFRNLFEYSEARQAVQEAFLRCRQWSVSSFPTLLLESNNKMA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC PLATGFVTTEQVLSRLRQRI CHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCSWCWGISPTVSKVMAFCEAEGIEFSMTMGGLRAGGGDPWNTAFKDFLHNEWRHIAQVT CCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC GQPFGFTLLDAAHFDYDTEPACRAVMTVQLLQTRKNLAPSIALKFFSAIQRKFYVEGKDP CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC KVTDFYADICASIGLDFAEFRNLFEYSEARQAVQEAFLRCRQWSVSSFPTLLLESNNKMA CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC PLATGFVTTEQVLSRLRQRI CHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA