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The map label for this gene is 153949341

Identifier: 153949341

GI number: 153949341

Start: 2131675

End: 2134215

Strand: Reverse

Name: 153949341

Synonym: YpsIP31758_1842

Alternate gene names: NA

Gene position: 2134215-2131675 (Counterclockwise)

Preceding gene: 153948915

Following gene: 153946893

Centisome position: 45.18

GC content: 47.78

Gene sequence:

>2541_bases
ATGAAATCATTAACCCCGCAGTTACTTAATGGCCAACAACTTCATGACCAGTTACAGCAGGTAACACAAGGTATCGACCA
AGCGATTGATTGGGTTAAGAGTACCCGCCAACATGCTGTTCGTTTGGATAGAGAAGCCGAACACTTAACCATTAAGTTAC
GCCGTATGCGTAATAAAGCGCACCCTCTATCTGAGACCGCGCTAGCCGCGATGACTATTGGTTTTGTGGGGCACTCACAG
GCGGGGAAAAAACACCTTATCTCGGCACTGGCGGCCAATGAACATGGCCGATTGGAAACCACGCTCGGGGGGAAAAAACT
CGACTTTTGGCAACAAATTAGGCCGGAATATCAAACAACGGGCTTGGTTACTCGCTTTAGCTATCAGACAGAAGGTCATC
AAACGCACGGTCATGAAAGCAGAGCAACAAATGAAGCTTATCCGGTTCAGCTCACCTTACTCAGCGAAGTAGATATCGCC
AAAATAATCACCCGTGCCTTCTTGCTGGATTGCCCTCAGGAAAATCCAGCTTATTCGTTGGATGAGCAACAGATTACCGA
ACATCTACGGCAGTTGATGATGCACAGGCGGCCAATCATTAACGCTGGAATCAATAGCGATGATGTGATTGCACTTTGGG
ACTCCCTTGCCCACCACGACACACAACGCCAGAAAGAACTGGCGACTCACTTCTGGCCTACCGCGATTGAACTGGCACCG
TATCTGAGTATTGATGACCGGGCCAAATTATTTTCGTTATTGTGGGGAAAAAACGATCCACTCACTGACGCTTATCGCCA
TTTTTCCTACATTTTGCAGCACCTTAGCGGCGCACAGCAATTATTAGCACCGCTAAGTGTTTTGGTTGACGATACCCTGT
TACCTGCCAATGGTGTCATGAATATTGCCACGCTTGGTGACTTGAATACACCTGCAGATAACCCTATCCAAGTGCTTCCC
TTGATCAGCGGTCATACCGCGAAATGCGTGACACTGTCACAAGCGGAATTGACGCTGTTAGCGGTGGAACTGAAGATCCC
ACTCGATAAACCCGCGCGTGAAAGTGCATTTGAATCCGTTGAATTGCTTAATTTTCCTGATGCTCGCGGTTCGCAAACTA
TCCCGGCATTAATGGAAAACGCCGCTTATCCGCTGGCCTCGCTACTGTCACAGGCTAAAAATGCCTATTTACTCGAACGT
TATACCAACCAACAGCAAATCAACCTGTTATTGGTGTGTACCGCCACCGATCAGCGTTCAGAGATAAAAAGTACCAGCAA
GGCATTGGATTATTGGGTTAAACAGACTCAGGGAGAGAGCGTTCAGATACGCTCGCGTCGTAATCCGGGTTTAATCTGGG
CCTTAACGCCCCATGATCAGCGCATTACCGCGAATCTACCTCTCTCCACCCCGACAGACGCCCAAACGCATGACGCGAAT
ATCAAAAATTACGATGAAGCGGTACAACGCTATGTTGGTAATCCCGGTGACAGTTGGGGAACCCTATTGGCATTGGATGC
ACGTGGGGTTGAACGGATGATCTCGTACCTATCGAAAGAAATCCTTCGGGATATCAAATCAGAACGTCTAACCGAACAAC
TTCACGAGTTACAACGGGAACTGACCAATAATCTGTTCGCGGGTTGGTATCAACCTTCGGTTACGGACGAACGACAGCAA
AAACAACGTATTGTAGAAATATTACTTAAAGCGTTGCAAACCCGTACTGGGGTACATGGTGAATTGTTGGAGCAATTACT
TCCTTCCCGCGATGAACTACGCCGCCTTTATCTGCAACAGCACCTTTATCTATCACCCCGCCTTTATCAACAAGAGAAAA
AAGGGGTTGCGGATTTTTTCACACCACTCGCCAGCACTGAACCTTTCAGTATCGGTATCGATATCGATCTGTTTAGTGAC
CTTCCCACTCCCACTGAGCCATCGCTGACACCACAAGCCAGACATGATAACGATGAAGCGGAGTATGCCGCTCATGTGCA
TTATTATTGGATAAATCATCTACGCCAACTGCCCGATAATACTGCGCTACTTGAATTACTGGGCGTCACTAAACCCACGA
TAGAACTGCTGGTCGCGGAATTCATCACTGCCAGTATTCGGCTGGATATTGCTGGGAATTTACGACAGGCACTGGCTGAT
AACGAACCGGCGGATCTGCATCGTGCAGCCAAAGCGGACCGTCAGGTTTCTCGTGCGCTCACTGTACTCGGTGATTTCAT
TGCCTGGTTAGGTTTTTTGCAAATCAGCGAAGATAAGCGCCCGGATAGCCGCATCAACCGAGGGTATAAAATTTTTGCCC
AGCCCCCTAAATCAGTATCAACTTTAGGGGTCTCTCACCGGTTAACGCAACTGGCATTAACCCCAACCAACAGTACCGCA
TTTTATATCTATGATTGGTTAGTGGGTTTGGGTGAAATGATTATTCAAAACGTGGGATATTCAGCCAGTAATGAGATAAG
CCCGGCACAGCGGCAACAACTGGCGGCAATATTATCGGTGATAAAACCCGCAAATGATTAA

Upstream 100 bases:

>100_bases
GTGTGCCCTTGCATCATCTGCGACTTAAATTGAACACATTAGCCAGCAATGGCTCAGGATCCCCCCATTATTGGATCGAC
AGCGGGAGCGTATTTAGAAA

Downstream 100 bases:

>100_bases
ATAGATGGCTGATAACGTTAAATAAAGGGGAACGTGCCACAAAAATGCGCAACTCCCCGACGGAGAAGCGCATTTTTTAA
ACAGCAGAACTCAAGTGACA

Product: hypothetical protein

Products: NA

Alternate protein names: Virulence Factor SrfC-Like Protein; Virulence Effector SrfC; Virulence Effector Protein; Virulence Factor SrfC; Virulence Protein; Virulence Factor Protein; Protein Conserved In Bacteria Virulence Factor; Type III Effector Protein; Coiled-Coil Structure; Protein Virulence Factor-Like Protein; Type III Secretion System Effector; HopL1 Protein

Number of amino acids: Translated: 846; Mature: 846

Protein sequence:

>846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALAAMTIGFVGHSQ
AGKKHLISALAANEHGRLETTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIITRAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLP
LISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFAGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSVIKPAND

Sequences:

>Translated_846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALAAMTIGFVGHSQ
AGKKHLISALAANEHGRLETTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIITRAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLP
LISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFAGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSVIKPAND
>Mature_846_residues
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKAHPLSETALAAMTIGFVGHSQ
AGKKHLISALAANEHGRLETTLGGKKLDFWQQIRPEYQTTGLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIA
KIITRAFLLDCPQENPAYSLDEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPANGVMNIATLGDLNTPADNPIQVLP
LISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESVELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLER
YTNQQQINLLLVCTATDQRSEIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRELTNNLFAGWYQPSVTDERQQ
KQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQHLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSD
LPTPTEPSLTPQARHDNDEAEYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVSTLGVSHRLTQLALTPTNSTA
FYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSVIKPAND

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95143; Mature: 95143

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKA
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPLSETALAAMTIGFVGHSQAGKKHLISALAANEHGRLETTLGGKKLDFWQQIRPEYQTT
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCHHHC
GLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIAKIITRAFLLDCPQENPAYSL
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
DEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
CHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPANGVM
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCE
NIATLGDLNTPADNPIQVLPLISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESV
EEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHH
ELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLVCTATDQRS
HHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCEEEEEEEEECCCCHH
EIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRE
CCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNNLFAGWYQPSVTDERQQKQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQ
HHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHH
HLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQARHDNDEA
HHHCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
EYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECHHHHHHHCC
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCHHH
TLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSV
HHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IKPAND
HCCCCC
>Mature Secondary Structure
MKSLTPQLLNGQQLHDQLQQVTQGIDQAIDWVKSTRQHAVRLDREAEHLTIKLRRMRNKA
CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HPLSETALAAMTIGFVGHSQAGKKHLISALAANEHGRLETTLGGKKLDFWQQIRPEYQTT
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHCCCHHHC
GLVTRFSYQTEGHQTHGHESRATNEAYPVQLTLLSEVDIAKIITRAFLLDCPQENPAYSL
CEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
DEQQITEHLRQLMMHRRPIINAGINSDDVIALWDSLAHHDTQRQKELATHFWPTAIELAP
CHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
YLSIDDRAKLFSLLWGKNDPLTDAYRHFSYILQHLSGAQQLLAPLSVLVDDTLLPANGVM
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCE
NIATLGDLNTPADNPIQVLPLISGHTAKCVTLSQAELTLLAVELKIPLDKPARESAFESV
EEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHH
ELLNFPDARGSQTIPALMENAAYPLASLLSQAKNAYLLERYTNQQQINLLLVCTATDQRS
HHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCEEEEEEEEECCCCHH
EIKSTSKALDYWVKQTQGESVQIRSRRNPGLIWALTPHDQRITANLPLSTPTDAQTHDAN
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
IKNYDEAVQRYVGNPGDSWGTLLALDARGVERMISYLSKEILRDIKSERLTEQLHELQRE
CCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNNLFAGWYQPSVTDERQQKQRIVEILLKALQTRTGVHGELLEQLLPSRDELRRLYLQQ
HHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHH
HLYLSPRLYQQEKKGVADFFTPLASTEPFSIGIDIDLFSDLPTPTEPSLTPQARHDNDEA
HHHCCCHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCH
EYAAHVHYYWINHLRQLPDNTALLELLGVTKPTIELLVAEFITASIRLDIAGNLRQALAD
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHEEEECHHHHHHHCC
NEPADLHRAAKADRQVSRALTVLGDFIAWLGFLQISEDKRPDSRINRGYKIFAQPPKSVS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEEECCCCHHH
TLGVSHRLTQLALTPTNSTAFYIYDWLVGLGEMIIQNVGYSASNEISPAQRQQLAAILSV
HHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IKPAND
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA