| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949336
Identifier: 153949336
GI number: 153949336
Start: 3885370
End: 3885834
Strand: Reverse
Name: 153949336
Synonym: YpsIP31758_3447
Alternate gene names: NA
Gene position: 3885834-3885370 (Counterclockwise)
Preceding gene: 153950708
Following gene: 153950401
Centisome position: 82.27
GC content: 36.34
Gene sequence:
>465_bases ATGAAGAAATCTATGCTGTTTTTATCTCTAATATTGTCTGCGCCATATATTATGGCGAATGAACTCTCTTCCTGCCCAAA TAAATCTGAAATAAGTTATCAGCAGGGGGTTTATACAACACCTGATGGTAAATGGTTAGGGGTGTCGGTTGGTGTGGAAA ATAGCGGAGATGTACGACATTTCCTATATGTAAAGTATATTCCTTATAATGCATTTAATATGGATATTGGCAGGCTAAAT AATTGCACTTACGCTTTAGCATCAGGCAGTGTCGATATGTATTTTTATGATGAGCGAGCATTAGCTCTTGAAGGTGTATT TGTTTCACTTATGGGGCATATGTTCTGGGAAAAAACAACCACATCAGGTAAGGATTATTATATTTGTACTGGAACATCAG TAAGTGACTGTACATTTACACGGCTTGACGATGATGTTGTAGATGATTATAAAAATAGACAGTGA
Upstream 100 bases:
>100_bases ATAAAATAACCTTACTATTCAGTCGTATGGGTGAGTATATTGACTCTGTTAAATTGAAAAGGTTATTTTTTGGATGGGGT AAATAATAAGAGGAGAATAA
Downstream 100 bases:
>100_bases TGCTGTTAATTATAGGTGAAATCTAAAGACGCATAGGCTCATGCGTCTTTAATTAGCGTCTTTACAAGATTAATTTGGCA TCACACCAATTAGTGTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKKSMLFLSLILSAPYIMANELSSCPNKSEISYQQGVYTTPDGKWLGVSVGVENSGDVRHFLYVKYIPYNAFNMDIGRLN NCTYALASGSVDMYFYDERALALEGVFVSLMGHMFWEKTTTSGKDYYICTGTSVSDCTFTRLDDDVVDDYKNRQ
Sequences:
>Translated_154_residues MKKSMLFLSLILSAPYIMANELSSCPNKSEISYQQGVYTTPDGKWLGVSVGVENSGDVRHFLYVKYIPYNAFNMDIGRLN NCTYALASGSVDMYFYDERALALEGVFVSLMGHMFWEKTTTSGKDYYICTGTSVSDCTFTRLDDDVVDDYKNRQ >Mature_154_residues MKKSMLFLSLILSAPYIMANELSSCPNKSEISYQQGVYTTPDGKWLGVSVGVENSGDVRHFLYVKYIPYNAFNMDIGRLN NCTYALASGSVDMYFYDERALALEGVFVSLMGHMFWEKTTTSGKDYYICTGTSVSDCTFTRLDDDVVDDYKNRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17414; Mature: 17414
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSMLFLSLILSAPYIMANELSSCPNKSEISYQQGVYTTPDGKWLGVSVGVENSGDVRH CCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCEEE FLYVKYIPYNAFNMDIGRLNNCTYALASGSVDMYFYDERALALEGVFVSLMGHMFWEKTT EEEEEEECCCEEECCCCCCCCCEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHCCC TSGKDYYICTGTSVSDCTFTRLDDDVVDDYKNRQ CCCCEEEEEECCCCCCEEEECCCCHHHHHHCCCC >Mature Secondary Structure MKKSMLFLSLILSAPYIMANELSSCPNKSEISYQQGVYTTPDGKWLGVSVGVENSGDVRH CCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEECCCCCCCEEE FLYVKYIPYNAFNMDIGRLNNCTYALASGSVDMYFYDERALALEGVFVSLMGHMFWEKTT EEEEEEECCCEEECCCCCCCCCEEEEECCCEEEEEECCCEEEHHHHHHHHHHHHHHHCCC TSGKDYYICTGTSVSDCTFTRLDDDVVDDYKNRQ CCCCEEEEEECCCCCCEEEECCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA