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The map label for this gene is rhsD [C]

Identifier: 153949316

GI number: 153949316

Start: 473406

End: 476171

Strand: Reverse

Name: rhsD [C]

Synonym: YpsIP31758_0407

Alternate gene names: 153949316

Gene position: 476171-473406 (Counterclockwise)

Preceding gene: 153950364

Following gene: 153950752

Centisome position: 10.08

GC content: 47.04

Gene sequence:

>2766_bases
ATGAGCCAATATTTTATTCCATCACTTACTGCCAACACCCCCAGTATTGCCGTTCACGATAACCGGGGGTTAGCCATTCG
CACACTGGCTTATAACCGCCGCAGTCATGATGAAACCGTTGACGAACTGAGCAGCCGCAACCGCTATAACGCCTCCGGTC
AGTTAATCGCCAGCCGCGACCCGCGCCTTGAGGTGGATAATTTTCGCTATCAATACAGCCTCAGCGGTGTTCCCCTGCGT
ACCGACAGCGTCGATAGCGGCAGTACGCTGCAACTGGCAGATAGTGCTGGCCGCACGGTGCTCACGCTGGATGCACACCA
CACCCGCCGCTGGGTAGAGTATGAGACCGGTGAGCACAGTTTAGATCGCCCACTAAGTTACCGCGAGCAAGCCAAAGGCG
GCCTGAAAACGGTTACCGACCGCTTTTTCTATGGCGAAAATAGCGAACAGGATAAAGGCTGTAATCTCAACGGTACATGT
GTGCGCCATTACGACAGCGCCGGTTTACAGGCACTGATTAGCCAGTCGATTATTGGTATACCACTGCAGCAACAGCGCCG
TCTGCTAACGGATACCAAAGGCCCGGTTGACTGGTTTGGCGAAAAGGAGAACTGGGGCACTCGCCTGAGTGAATCGCCGT
TTGTTAGCCATAGCACCACCAATGCTCTCGGCCAGTTAATCACGCAAACCGATGCCAAAGGCCATATCCAGCGCATGGCC
TACAACCGTGCCGGGCAACTTATCGGTTCGTGGTTAACGGTAAAAAATGGCGTGGAGCAGCCCATTGTATACTCACTCAC
CTATTCAGCCGCCGGGCAAAAACTGCGCGAAGAGAGTGGCAACGGGGTCATTACCGAATACCGTTATGAACCCCAGACCC
AGCGTTTAATCGCCATTAAAACCACCCGGCCAGCGAAGAAAGACCGCCCGACCCTGTTACAAGACCTGCGTTATGATTAT
GACCCGGTCGGGAATATTCTCGCCATCCATAACGACGCCGAAGCCACCCGCTTCTACCGTAATCAGAAAATCGTGCCGGA
AACCACTTACCGCTACGATGCACTGTATCAGCTTATTGAGGCCACCGGCCGTGAAGCCGATACCAACGGCATACAAAACA
GCCAGTTGCCCACGCTGGCGTCACTGAACGACAGCAACCAGTTCGTCAACTATACCCGCCGCTACCACTATGACCGCGCC
GGTAACCTGCTAAAAATTCAGCATACCGGTGCCAGCCAATACAGTACCCATATCACGGTGTCCGATTCGTCCAATCACGG
CATTCAGCAACAAGATGGCATCACTGCCCGTGATATTCGCTCCCAGTTTGATGCGGCGGGTAATCAGCGACAACTGCAAC
CCGGTCAACCCCTGCGCTGGAACAGCCGCAATCAGTTACAGCAGGTAGAGCCCGTGCCCCGCAACGACGGCATCAGTGAC
AGCGAAAGTTATCTCTATGATGGCAGCGGTAGCCGGGTGGTCAAAATCAGTCTCCATAAAACCCATAACGCCATCCAAAC
CCGTTCAGTCATTTATTTAGCGGGACTGGAACTGCGTAGCCAATATAACGGCAATAATCTGACAGAAGATTTTCAGGTGA
TGACCGTGGGTGCCGCGGGCCGTGCTCAGGTACGGGTATTACACTGGGAGCGCGGCCAACCCGCTGATATCGTCAATGAC
CAACTGCGTTACAGTTTCGATAACCACATTGGCTCGGCGTTAATCGAATTAGACAGCGACGGCGATATTATCAGCCAGGA
AGAATATTACCCATTTGGCGGCACCGCGGTGTTAGCCTCCCGTAATACCATGGAAGCTAAATATAAAACCGTTCGTTACT
CCGGTAAAGAGCGTGACACCACCGGACTGTATTATTACGGTTACCGTTATTACCAGCCATGGCTGGGCCGATGGTTAAGC
GCCGACCCCGCAGGCACTATAGACGGGCTGAATTTATACCGAATGGTGAGGAATAACCCTATAAAATTGGTGGACAGAGA
TGGGCTTCAGCCTGATAAAATAATAGGGCTAGAAAATTATGCAGAATATCTAGAAGAAACAATAGAAGATGAAAGTGAAT
TTTTAGAAATAGCACAAGGAATAGGCGCTGCTTTTTTAGATGCATCATTAATATTACCAGAAGCAATCGCCAGGTTAAGG
GATGAGAGCCTAGCAGATGAAAATGAAATCCTGATAAGAAAATTTTTACCCGATCAGGAAGTTGATTTCTCACGAATAAA
AGACGAGCTACTTGATAGATTTGACAATATGGAAGACATGATTAATGAAGTAATAGAAAATAGAAATACAAAAATTATCT
TTGATTTGAAAAGCAACACAAACTCAATAGCTTATGTTAATTATAAAGATGAATTACATAGAATAAACGTTACAAATTTA
TTTATAAAAAATGTTGGAACAGTAAGTAATATCCATGCAATATTACATGAGTTATCTCATATGGAGCTTCCAACAAGAAG
AGTAACAAAAGATTATTATTACATTAGCGAATTTAGTACCGAAGAAATATTTCCAGACACTGAAGATTTTTTATCTATAG
CACAAGAATCTTTCGAGAATTATCATATTATAATGAGAACTGCACTTGATAAAAATATGGATGAAAGTCCCTCTTCCATG
TTAACAAGAGAACTTTATGACACATCAGATGATATTAGTATTGCTCTAGAGAATGCTGATCACATTGCAATATTAGCCTT
AGCATTAGGGAGATCCGAAATACAACACAGCCAATATGCATTATAA

Upstream 100 bases:

>100_bases
TTCTAAATTTAAACTCTATTATCCAAAGGTAAAATCCCAAAATTCATTACAAAAAAACAATTCTGATCTTTAAAACGGTC
CTATATTAGAGGAAAGGTTT

Downstream 100 bases:

>100_bases
TTAAATTATTATAATATATTGAGATAAAATAAACTCATCTCATGCTATTTAATCTCTATATCCAAGTCACTTCGAGATGT
AGATAGGCGGAAGCCAAGAG

Product: insecticidal toxin complex protein

Products: NA

Alternate protein names: Insecticidal xin Complex; Insecticidal xin Protein; Insecticidal xin Complex Protein; YD Repeat Protein; C Component Of Insecticidal xin Complex; Rhs Family Protein-Like Protein; Insecticidal xin; Zinc Finger C2H2-Type Domain-Containing Protein; FG-GAP Repeat Protein; Insecticidal xin SepC/Tcc Class; Insecticial xin; Integrins Alpha Chain; Insecticidal xin Complex-Like Protein; Insecticial xin Complex; Cytoplasmic Membrane Protein; Insecticidal xin SepC/TccC; Rhs Family Protein; Insecticidal xin Complex Protein TcaC; Insecticidal xin Complex TccC; Insecticidal xin Complex Protein Tccc

Number of amino acids: Translated: 921; Mature: 920

Protein sequence:

>921_residues
MSQYFIPSLTANTPSIAVHDNRGLAIRTLAYNRRSHDETVDELSSRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLR
TDSVDSGSTLQLADSAGRTVLTLDAHHTRRWVEYETGEHSLDRPLSYREQAKGGLKTVTDRFFYGENSEQDKGCNLNGTC
VRHYDSAGLQALISQSIIGIPLQQQRRLLTDTKGPVDWFGEKENWGTRLSESPFVSHSTTNALGQLITQTDAKGHIQRMA
YNRAGQLIGSWLTVKNGVEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIAIKTTRPAKKDRPTLLQDLRYDY
DPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPTLASLNDSNQFVNYTRRYHYDRA
GNLLKIQHTGASQYSTHITVSDSSNHGIQQQDGITARDIRSQFDAAGNQRQLQPGQPLRWNSRNQLQQVEPVPRNDGISD
SESYLYDGSGSRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAGRAQVRVLHWERGQPADIVND
QLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLASRNTMEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLS
ADPAGTIDGLNLYRMVRNNPIKLVDRDGLQPDKIIGLENYAEYLEETIEDESEFLEIAQGIGAAFLDASLILPEAIARLR
DESLADENEILIRKFLPDQEVDFSRIKDELLDRFDNMEDMINEVIENRNTKIIFDLKSNTNSIAYVNYKDELHRINVTNL
FIKNVGTVSNIHAILHELSHMELPTRRVTKDYYYISEFSTEEIFPDTEDFLSIAQESFENYHIIMRTALDKNMDESPSSM
LTRELYDTSDDISIALENADHIAILALALGRSEIQHSQYAL

Sequences:

>Translated_921_residues
MSQYFIPSLTANTPSIAVHDNRGLAIRTLAYNRRSHDETVDELSSRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLR
TDSVDSGSTLQLADSAGRTVLTLDAHHTRRWVEYETGEHSLDRPLSYREQAKGGLKTVTDRFFYGENSEQDKGCNLNGTC
VRHYDSAGLQALISQSIIGIPLQQQRRLLTDTKGPVDWFGEKENWGTRLSESPFVSHSTTNALGQLITQTDAKGHIQRMA
YNRAGQLIGSWLTVKNGVEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIAIKTTRPAKKDRPTLLQDLRYDY
DPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPTLASLNDSNQFVNYTRRYHYDRA
GNLLKIQHTGASQYSTHITVSDSSNHGIQQQDGITARDIRSQFDAAGNQRQLQPGQPLRWNSRNQLQQVEPVPRNDGISD
SESYLYDGSGSRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAGRAQVRVLHWERGQPADIVND
QLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLASRNTMEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLS
ADPAGTIDGLNLYRMVRNNPIKLVDRDGLQPDKIIGLENYAEYLEETIEDESEFLEIAQGIGAAFLDASLILPEAIARLR
DESLADENEILIRKFLPDQEVDFSRIKDELLDRFDNMEDMINEVIENRNTKIIFDLKSNTNSIAYVNYKDELHRINVTNL
FIKNVGTVSNIHAILHELSHMELPTRRVTKDYYYISEFSTEEIFPDTEDFLSIAQESFENYHIIMRTALDKNMDESPSSM
LTRELYDTSDDISIALENADHIAILALALGRSEIQHSQYAL
>Mature_920_residues
SQYFIPSLTANTPSIAVHDNRGLAIRTLAYNRRSHDETVDELSSRNRYNASGQLIASRDPRLEVDNFRYQYSLSGVPLRT
DSVDSGSTLQLADSAGRTVLTLDAHHTRRWVEYETGEHSLDRPLSYREQAKGGLKTVTDRFFYGENSEQDKGCNLNGTCV
RHYDSAGLQALISQSIIGIPLQQQRRLLTDTKGPVDWFGEKENWGTRLSESPFVSHSTTNALGQLITQTDAKGHIQRMAY
NRAGQLIGSWLTVKNGVEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIAIKTTRPAKKDRPTLLQDLRYDYD
PVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIEATGREADTNGIQNSQLPTLASLNDSNQFVNYTRRYHYDRAG
NLLKIQHTGASQYSTHITVSDSSNHGIQQQDGITARDIRSQFDAAGNQRQLQPGQPLRWNSRNQLQQVEPVPRNDGISDS
ESYLYDGSGSRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAGRAQVRVLHWERGQPADIVNDQ
LRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLASRNTMEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLSA
DPAGTIDGLNLYRMVRNNPIKLVDRDGLQPDKIIGLENYAEYLEETIEDESEFLEIAQGIGAAFLDASLILPEAIARLRD
ESLADENEILIRKFLPDQEVDFSRIKDELLDRFDNMEDMINEVIENRNTKIIFDLKSNTNSIAYVNYKDELHRINVTNLF
IKNVGTVSNIHAILHELSHMELPTRRVTKDYYYISEFSTEEIFPDTEDFLSIAQESFENYHIIMRTALDKNMDESPSSML
TRELYDTSDDISIALENADHIAILALALGRSEIQHSQYAL

Specific function: Rhs Elements Have A Nonessential Function. They May Play An Important Role In The Natural Ecology Of The Cell. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104686; Mature: 104555

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYFIPSLTANTPSIAVHDNRGLAIRTLAYNRRSHDETVDELSSRNRYNASGQLIASRD
CCCEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEECCC
PRLEVDNFRYQYSLSGVPLRTDSVDSGSTLQLADSAGRTVLTLDAHHTRRWVEYETGEHS
CCEEECCEEEEEEECCCEEECCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCC
LDRPLSYREQAKGGLKTVTDRFFYGENSEQDKGCNLNGTCVRHYDSAGLQALISQSIIGI
CCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC
PLQQQRRLLTDTKGPVDWFGEKENWGTRLSESPFVSHSTTNALGQLITQTDAKGHIQRMA
CHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
YNRAGQLIGSWLTVKNGVEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIAIK
HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEE
TTRPAKKDRPTLLQDLRYDYDPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIE
ECCCCCCCCCHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ATGREADTNGIQNSQLPTLASLNDSNQFVNYTRRYHYDRAGNLLKIQHTGASQYSTHITV
HCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEE
SDSSNHGIQQQDGITARDIRSQFDAAGNQRQLQPGQPLRWNSRNQLQQVEPVPRNDGISD
ECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
SESYLYDGSGSRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAG
CCCEEECCCCCEEEEEEEECCCCHHHHCCEEEEECHHHHHCCCCCCCCCCEEEEEECCCC
RAQVRVLHWERGQPADIVNDQLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLAS
CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCEEEEEC
RNTMEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLSADPAGTIDGLNLYRMVRNNP
CCCHHHHEEEEEECCCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHCCCC
IKLVDRDGLQPDKIIGLENYAEYLEETIEDESEFLEIAQGIGAAFLDASLILPEAIARLR
EEEEECCCCCHHHEECHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DESLADENEILIRKFLPDQEVDFSRIKDELLDRFDNMEDMINEVIENRNTKIIFDLKSNT
HHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCC
NSIAYVNYKDELHRINVTNLFIKNVGTVSNIHAILHELSHMELPTRRVTKDYYYISEFST
CEEEEEEEHHHHEEEEHHEEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCC
EEIFPDTEDFLSIAQESFENYHIIMRTALDKNMDESPSSMLTRELYDTSDDISIALENAD
HHCCCCHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC
HIAILALALGRSEIQHSQYAL
CEEEEEEHHCHHHHHHHHCCC
>Mature Secondary Structure 
SQYFIPSLTANTPSIAVHDNRGLAIRTLAYNRRSHDETVDELSSRNRYNASGQLIASRD
CCEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEECCC
PRLEVDNFRYQYSLSGVPLRTDSVDSGSTLQLADSAGRTVLTLDAHHTRRWVEYETGEHS
CCEEECCEEEEEEECCCEEECCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCC
LDRPLSYREQAKGGLKTVTDRFFYGENSEQDKGCNLNGTCVRHYDSAGLQALISQSIIGI
CCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC
PLQQQRRLLTDTKGPVDWFGEKENWGTRLSESPFVSHSTTNALGQLITQTDAKGHIQRMA
CHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
YNRAGQLIGSWLTVKNGVEQPIVYSLTYSAAGQKLREESGNGVITEYRYEPQTQRLIAIK
HHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEE
TTRPAKKDRPTLLQDLRYDYDPVGNILAIHNDAEATRFYRNQKIVPETTYRYDALYQLIE
ECCCCCCCCCHHHHHHCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ATGREADTNGIQNSQLPTLASLNDSNQFVNYTRRYHYDRAGNLLKIQHTGASQYSTHITV
HCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEE
SDSSNHGIQQQDGITARDIRSQFDAAGNQRQLQPGQPLRWNSRNQLQQVEPVPRNDGISD
ECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
SESYLYDGSGSRVVKISLHKTHNAIQTRSVIYLAGLELRSQYNGNNLTEDFQVMTVGAAG
CCCEEECCCCCEEEEEEEECCCCHHHHCCEEEEECHHHHHCCCCCCCCCCEEEEEECCCC
RAQVRVLHWERGQPADIVNDQLRYSFDNHIGSALIELDSDGDIISQEEYYPFGGTAVLAS
CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCCCCCCCCEEEEEC
RNTMEAKYKTVRYSGKERDTTGLYYYGYRYYQPWLGRWLSADPAGTIDGLNLYRMVRNNP
CCCHHHHEEEEEECCCCCCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHCCCC
IKLVDRDGLQPDKIIGLENYAEYLEETIEDESEFLEIAQGIGAAFLDASLILPEAIARLR
EEEEECCCCCHHHEECHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
DESLADENEILIRKFLPDQEVDFSRIKDELLDRFDNMEDMINEVIENRNTKIIFDLKSNT
HHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCC
NSIAYVNYKDELHRINVTNLFIKNVGTVSNIHAILHELSHMELPTRRVTKDYYYISEFST
CEEEEEEEHHHHEEEEHHEEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCC
EEIFPDTEDFLSIAQESFENYHIIMRTALDKNMDESPSSMLTRELYDTSDDISIALENAD
HHCCCCHHHHHHHHHHHCCCEEEEEEEHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC
HIAILALALGRSEIQHSQYAL
CEEEEEEHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA