| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949263
Identifier: 153949263
GI number: 153949263
Start: 2840772
End: 2841458
Strand: Reverse
Name: 153949263
Synonym: YpsIP31758_2508
Alternate gene names: NA
Gene position: 2841458-2840772 (Counterclockwise)
Preceding gene: 153949289
Following gene: 153949846
Centisome position: 60.16
GC content: 61.28
Gene sequence:
>687_bases ATGAATCCTCACCTAACCGAACACCCCCCAGTCGGGGATATTGACGTCCTGTTGCAGGACACCTGGCTACAGGTGATCAG CCTGCGTCAAGGGGTAACCTGTGCCGAGGGCGAAGGGCAGGCATTCTGGCAGCGCTGTGTGGCGGACATTGAACGTGTCC ATCAGGCGCTGAAAGACGCCGGTCACAGCGAGCAGAGTTGCCAGCACATCCGATACGCCCAATGTGCACTGCTGGATGAG ACCGTGAAAGGGCGCGGTGTACAGGATGACGCCTACTTCGTGTGGTGCCATTCGCCCTTACAGGCGCATTTTTTCAATAC CCTGGATGCCGGGAGCCAGTTGTACGAGCAGATGCGCGCCGTGTTGCGTGAACCTGCGCCGGACAGCGCGGTACTGACCT GTTTTCACCGGGTATTGATGTTGGGCTTCCTCGGCGGGTACGCCTCCCCGGCGGCTTCTGAACGGGAGCAACTGATCGAT CAACTGAGCGTGCAGGTACCGGCGTTCAGTGTCGCGCCATCCGGTGGGATCCTGGCAAGCGCCGCCTCCCGCAACCGGTT GGGGATCTGGCTGCGTTACTGGCCGGTACGGCTCGGGCTGGCTGCGCTGATGGTCGCGCTGTTGTGGTGGGGCCTTGATC ACTGGCTGTCCGGTCTGTTAACCACCTTACTGCCGGAGCCGGTGTAA
Upstream 100 bases:
>100_bases ACCCTGCGGCGACGCAGATGATGGAGACGGGGGCCTGTGTGTTCTATGTACCCGGTACGCTGGGTGAGATCCAACTGGAG CTGTTTGCGGTGCTACGCGC
Downstream 100 bases:
>100_bases TGAGTCGGTGGTGGCAACGTGGGTTGTGGCTCTGGGCGGGTTTGCTGGCGGTCATCTTGTGTCTGGCATTTCTGCCGCTC TCCCCGTGGGGGCGCTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRAVLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLID QLSVQVPAFSVAPSGGILASAASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV
Sequences:
>Translated_228_residues MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRAVLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLID QLSVQVPAFSVAPSGGILASAASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV >Mature_228_residues MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRAVLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLID QLSVQVPAFSVAPSGGILASAASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV
Specific function: Unknown
COG id: COG3455
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25279; Mature: 25279
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GHSEQSCQHIRYAQCALLDETVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH VLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLIDQLSVQVPAFSVAPSGGILAS HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEC AASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GHSEQSCQHIRYAQCALLDETVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH VLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLIDQLSVQVPAFSVAPSGGILAS HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEC AASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA